Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-7-dv9A0A075B639 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-7-dv9A0A075B639 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.46■□□□□ 0.23
Trav6-7-dv9A0A075B639 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trav6-7-dv9A0A075B639 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-7-dv9A0A075B639 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.46■□□□□ 0.23
Trav6-7-dv9A0A075B639 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-7-dv9A0A075B639 Gm13146-201ENSMUST00000118508 780 ntBASIC16.46■□□□□ 0.23
Trav6-7-dv9A0A075B639 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-7-dv9A0A075B639 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trav6-7-dv9A0A075B639 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-7-dv9A0A075B639 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trav6-7-dv9A0A075B639 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-7-dv9A0A075B639 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-7-dv9A0A075B639 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Trav6-7-dv9A0A075B639 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-7-dv9A0A075B639 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav6-7-dv9A0A075B639 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav6-7-dv9A0A075B639 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav6-7-dv9A0A075B639 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Trav6-7-dv9A0A075B639 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-7-dv9A0A075B639 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-7-dv9A0A075B639 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-7-dv9A0A075B639 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-7-dv9A0A075B639 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-7-dv9A0A075B639 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-7-dv9A0A075B639 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
Trav6-7-dv9A0A075B639 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trav6-7-dv9A0A075B639 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.45■□□□□ 0.22
Trav6-7-dv9A0A075B639 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-7-dv9A0A075B639 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-7-dv9A0A075B639 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-7-dv9A0A075B639 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-7-dv9A0A075B639 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.44■□□□□ 0.22
Trav6-7-dv9A0A075B639 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
Trav6-7-dv9A0A075B639 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-7-dv9A0A075B639 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-7-dv9A0A075B639 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-7-dv9A0A075B639 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-7-dv9A0A075B639 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-7-dv9A0A075B639 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.44■□□□□ 0.22
Trav6-7-dv9A0A075B639 Reep4-203ENSMUST00000226563 1444 ntBASIC16.44■□□□□ 0.22
Trav6-7-dv9A0A075B639 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-7-dv9A0A075B639 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6-7-dv9A0A075B639 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6-7-dv9A0A075B639 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Trav6-7-dv9A0A075B639 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.43■□□□□ 0.22
Trav6-7-dv9A0A075B639 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Trav6-7-dv9A0A075B639 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6-7-dv9A0A075B639 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trav6-7-dv9A0A075B639 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6-7-dv9A0A075B639 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.43■□□□□ 0.22
Trav6-7-dv9A0A075B639 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.43■□□□□ 0.22
Trav6-7-dv9A0A075B639 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trav6-7-dv9A0A075B639 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.43■□□□□ 0.22
Trav6-7-dv9A0A075B639 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Trav6-7-dv9A0A075B639 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6-7-dv9A0A075B639 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.43■□□□□ 0.22
Trav6-7-dv9A0A075B639 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6-7-dv9A0A075B639 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6-7-dv9A0A075B639 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trav6-7-dv9A0A075B639 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6-7-dv9A0A075B639 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6-7-dv9A0A075B639 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.42■□□□□ 0.22
Trav6-7-dv9A0A075B639 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trav6-7-dv9A0A075B639 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trav6-7-dv9A0A075B639 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trav6-7-dv9A0A075B639 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6-7-dv9A0A075B639 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.42■□□□□ 0.22
Trav6-7-dv9A0A075B639 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trav6-7-dv9A0A075B639 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6-7-dv9A0A075B639 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.42■□□□□ 0.22
Trav6-7-dv9A0A075B639 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6-7-dv9A0A075B639 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6-7-dv9A0A075B639 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6-7-dv9A0A075B639 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6-7-dv9A0A075B639 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trav6-7-dv9A0A075B639 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.42■□□□□ 0.22
Trav6-7-dv9A0A075B639 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6-7-dv9A0A075B639 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trav6-7-dv9A0A075B639 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6-7-dv9A0A075B639 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6-7-dv9A0A075B639 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6-7-dv9A0A075B639 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6-7-dv9A0A075B639 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6-7-dv9A0A075B639 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6-7-dv9A0A075B639 Gm13234-201ENSMUST00000120010 747 ntBASIC16.41■□□□□ 0.22
Trav6-7-dv9A0A075B639 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.41■□□□□ 0.22
Trav6-7-dv9A0A075B639 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6-7-dv9A0A075B639 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.41■□□□□ 0.22
Trav6-7-dv9A0A075B639 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trav6-7-dv9A0A075B639 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6-7-dv9A0A075B639 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.4■□□□□ 0.22
Trav6-7-dv9A0A075B639 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-7-dv9A0A075B639 Gm13534-201ENSMUST00000121169 513 ntBASIC16.4■□□□□ 0.22
Trav6-7-dv9A0A075B639 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-7-dv9A0A075B639 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trav6-7-dv9A0A075B639 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-7-dv9A0A075B639 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-7-dv9A0A075B639 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms