Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Col18a1P39061 CT009713.1-201ENSMUST00000224828 853 ntBASIC9.88□□□□□ -0.83
Col18a1P39061 AC102139.1-201ENSMUST00000227000 251 ntBASIC9.88□□□□□ -0.83
Col18a1P39061 AC125117.2-201ENSMUST00000228344 1140 ntBASIC9.88□□□□□ -0.83
Col18a1P39061 Atg9a-201ENSMUST00000040689 3764 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col18a1P39061 Klhdc7a-201ENSMUST00000105031 7807 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Col18a1P39061 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col18a1P39061 Gm36120-201ENSMUST00000214393 1734 ntTSL 5 BASIC9.88□□□□□ -0.83
Col18a1P39061 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col18a1P39061 AC155234.1-201ENSMUST00000225610 2823 ntBASIC9.87□□□□□ -0.83
Col18a1P39061 Nif3l1-202ENSMUST00000114337 2168 ntTSL 2 BASIC9.87□□□□□ -0.83
Col18a1P39061 Gm45515-201ENSMUST00000210796 2141 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Col18a1P39061 Gm45705-201ENSMUST00000211831 2134 ntBASIC9.87□□□□□ -0.83
Col18a1P39061 Zfp607a-201ENSMUST00000053722 2061 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Col18a1P39061 Bivm-202ENSMUST00000114709 3570 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col18a1P39061 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col18a1P39061 Gm42700-201ENSMUST00000199071 2437 ntBASIC9.87□□□□□ -0.83
Col18a1P39061 Dclk1-203ENSMUST00000167204 6025 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Col18a1P39061 Gm38123-201ENSMUST00000194990 2779 ntBASIC9.87□□□□□ -0.83
Col18a1P39061 Gm4894-202ENSMUST00000216428 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col18a1P39061 Ccdc71-202ENSMUST00000193170 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col18a1P39061 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC9.87□□□□□ -0.83
Col18a1P39061 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Col18a1P39061 Gm23225-201ENSMUST00000158121 114 ntBASIC9.87□□□□□ -0.83
Col18a1P39061 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC9.87□□□□□ -0.83
Col18a1P39061 Gm4904-201ENSMUST00000178243 1195 ntBASIC9.87□□□□□ -0.83
Col18a1P39061 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Col18a1P39061 Gm36965-201ENSMUST00000193797 394 ntBASIC9.87□□□□□ -0.83
Col18a1P39061 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC9.87□□□□□ -0.83
Col18a1P39061 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC9.87□□□□□ -0.83
Col18a1P39061 Mkl1-201ENSMUST00000109579 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col18a1P39061 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC9.87□□□□□ -0.83
Col18a1P39061 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Col18a1P39061 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Col18a1P39061 Frrs1-201ENSMUST00000040260 2377 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col18a1P39061 Trim17-202ENSMUST00000075141 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col18a1P39061 Gm45718-201ENSMUST00000207577 3794 ntBASIC9.87□□□□□ -0.83
Col18a1P39061 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col18a1P39061 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Col18a1P39061 Gm37536-201ENSMUST00000194710 2491 ntBASIC9.87□□□□□ -0.83
Col18a1P39061 Cilp-201ENSMUST00000048762 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col18a1P39061 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Col18a1P39061 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col18a1P39061 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Col18a1P39061 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Col18a1P39061 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Col18a1P39061 Atxn7l1-210ENSMUST00000144586 3042 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Col18a1P39061 Synj2-209ENSMUST00000115790 4808 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Col18a1P39061 Ergic2-208ENSMUST00000136008 4174 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col18a1P39061 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Col18a1P39061 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Col18a1P39061 Gm15311-201ENSMUST00000119682 282 ntBASIC9.86□□□□□ -0.83
Col18a1P39061 Gm15305-201ENSMUST00000120354 288 ntBASIC9.86□□□□□ -0.83
Col18a1P39061 Gm13642-201ENSMUST00000121697 381 ntBASIC9.86□□□□□ -0.83
Col18a1P39061 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Col18a1P39061 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Col18a1P39061 Gm25219-201ENSMUST00000157545 330 ntBASIC9.86□□□□□ -0.83
Col18a1P39061 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col18a1P39061 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Col18a1P39061 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC9.86□□□□□ -0.83
Col18a1P39061 Gm8637-201ENSMUST00000212919 1085 ntBASIC9.86□□□□□ -0.83
Col18a1P39061 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Col18a1P39061 Gm24451-201ENSMUST00000083353 133 ntBASIC9.86□□□□□ -0.83
Col18a1P39061 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC9.86□□□□□ -0.83
Col18a1P39061 Nedd4-209ENSMUST00000184450 3329 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Col18a1P39061 Copb1-201ENSMUST00000033012 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col18a1P39061 Cass4-202ENSMUST00000103073 3600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col18a1P39061 Adgrg1-201ENSMUST00000093271 3574 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col18a1P39061 Rab36-206ENSMUST00000146440 2952 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Col18a1P39061 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC9.86□□□□□ -0.83
Col18a1P39061 Gm29154-211ENSMUST00000213655 1499 ntTSL 5 BASIC9.86□□□□□ -0.83
Col18a1P39061 CT573019.1-201ENSMUST00000227762 1689 ntBASIC9.86□□□□□ -0.83
Col18a1P39061 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Col18a1P39061 Cdh18-203ENSMUST00000164787 2744 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Col18a1P39061 Gm19656-201ENSMUST00000208543 4610 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Col18a1P39061 Wfikkn2-201ENSMUST00000061469 3516 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col18a1P39061 Ttc17-204ENSMUST00000111238 4590 ntTSL 5 BASIC9.86□□□□□ -0.83
Col18a1P39061 Olfr6-203ENSMUST00000213651 4457 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Col18a1P39061 Cpne8-202ENSMUST00000064391 3366 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col18a1P39061 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col18a1P39061 Gm24069-201ENSMUST00000104512 127 ntBASIC9.86□□□□□ -0.83
Col18a1P39061 Gm5255-201ENSMUST00000120125 642 ntBASIC9.86□□□□□ -0.83
Col18a1P39061 Gm14070-201ENSMUST00000120773 428 ntBASIC9.86□□□□□ -0.83
Col18a1P39061 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC9.86□□□□□ -0.83
Col18a1P39061 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC9.86□□□□□ -0.83
Col18a1P39061 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Col18a1P39061 Gm25690-201ENSMUST00000175439 77 ntBASIC9.86□□□□□ -0.83
Col18a1P39061 Gm24756-201ENSMUST00000177002 96 ntBASIC9.86□□□□□ -0.83
Col18a1P39061 Gm21756-201ENSMUST00000178380 930 ntBASIC9.86□□□□□ -0.83
Col18a1P39061 Gm21405-201ENSMUST00000179024 930 ntBASIC9.86□□□□□ -0.83
Col18a1P39061 Gm21191-201ENSMUST00000186484 930 ntBASIC9.86□□□□□ -0.83
Col18a1P39061 Scgb2b33-201ENSMUST00000187413 334 ntBASIC9.86□□□□□ -0.83
Col18a1P39061 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col18a1P39061 Gm29503-201ENSMUST00000191044 930 ntBASIC9.86□□□□□ -0.83
Col18a1P39061 Gm37669-201ENSMUST00000192184 820 ntBASIC9.86□□□□□ -0.83
Col18a1P39061 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC9.86□□□□□ -0.83
Col18a1P39061 AC164424.3-201ENSMUST00000220809 148 ntBASIC9.86□□□□□ -0.83
Col18a1P39061 AC166358.8-201ENSMUST00000223288 105 ntBASIC9.86□□□□□ -0.83
Col18a1P39061 AC124739.1-201ENSMUST00000223433 148 ntBASIC9.86□□□□□ -0.83
Col18a1P39061 AC158750.1-201ENSMUST00000226163 634 ntBASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms