Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Lpcat2b-201ENSMUST00000166599 2782 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
NcanP55066 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
NcanP55066 Gm42907-201ENSMUST00000199793 2148 ntBASIC8.12□□□□□ -1.11
NcanP55066 Vmn2r30-201ENSMUST00000072475 3616 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
NcanP55066 Gm4962-201ENSMUST00000199640 2977 ntBASIC8.12□□□□□ -1.11
NcanP55066 BC049715-203ENSMUST00000203499 2057 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
NcanP55066 Zfp607a-201ENSMUST00000053722 2061 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
NcanP55066 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NcanP55066 Ptpre-204ENSMUST00000209979 4959 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NcanP55066 Clip4-201ENSMUST00000024854 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NcanP55066 Synrg-202ENSMUST00000092834 7115 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
NcanP55066 Gm26902-201ENSMUST00000181307 3100 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NcanP55066 Gm38359-201ENSMUST00000191884 2225 ntBASIC8.11□□□□□ -1.11
NcanP55066 Dpp6-203ENSMUST00000120555 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
NcanP55066 Ctnnd1-210ENSMUST00000111684 6021 ntTSL 5 BASIC8.11□□□□□ -1.11
NcanP55066 Chrna1-201ENSMUST00000028515 4386 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NcanP55066 Ncoa7-210ENSMUST00000217138 2192 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NcanP55066 Slc6a3-201ENSMUST00000022100 3456 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NcanP55066 Gm43776-201ENSMUST00000199729 2914 ntBASIC8.11□□□□□ -1.11
NcanP55066 Mtpn-201ENSMUST00000031866 3960 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NcanP55066 Mei1-203ENSMUST00000188048 3197 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
NcanP55066 Exd1-203ENSMUST00000171024 5290 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NcanP55066 Lonp2-202ENSMUST00000121673 1550 ntTSL 5 BASIC8.11□□□□□ -1.11
NcanP55066 Olfr1357-201ENSMUST00000095473 1826 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
NcanP55066 Apod-203ENSMUST00000130560 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NcanP55066 Acbd5-202ENSMUST00000114523 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
NcanP55066 Smc2-201ENSMUST00000102915 5404 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NcanP55066 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
NcanP55066 Gm13176-201ENSMUST00000117910 477 ntBASIC8.11□□□□□ -1.11
NcanP55066 Gm13798-201ENSMUST00000118285 139 ntBASIC8.11□□□□□ -1.11
NcanP55066 Gm13218-201ENSMUST00000128180 265 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NcanP55066 Gm15507-203ENSMUST00000140958 658 ntTSL 3 BASIC8.11□□□□□ -1.11
NcanP55066 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC8.11□□□□□ -1.11
NcanP55066 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC8.11□□□□□ -1.11
NcanP55066 Anapc1-201ENSMUST00000014499 8942 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NcanP55066 Mir1953-201ENSMUST00000157866 89 ntBASIC8.11□□□□□ -1.11
NcanP55066 Gm22728-201ENSMUST00000158087 129 ntBASIC8.11□□□□□ -1.11
NcanP55066 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC8.11□□□□□ -1.11
NcanP55066 Gm26942-201ENSMUST00000182854 797 ntBASIC8.11□□□□□ -1.11
NcanP55066 Mir6241-201ENSMUST00000184225 103 ntBASIC8.11□□□□□ -1.11
NcanP55066 Mir7008-201ENSMUST00000184398 63 ntBASIC8.11□□□□□ -1.11
NcanP55066 Gm4860-201ENSMUST00000200368 454 ntBASIC8.11□□□□□ -1.11
NcanP55066 Gm42734-201ENSMUST00000201656 878 ntBASIC8.11□□□□□ -1.11
NcanP55066 Zg16-202ENSMUST00000205424 682 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
NcanP55066 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC8.11□□□□□ -1.11
NcanP55066 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC8.11□□□□□ -1.11
NcanP55066 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC8.11□□□□□ -1.11
NcanP55066 AC163296.1-202ENSMUST00000218395 661 ntBASIC8.11□□□□□ -1.11
NcanP55066 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NcanP55066 Gm7413-201ENSMUST00000219498 462 ntBASIC8.11□□□□□ -1.11
NcanP55066 AC163296.1-201ENSMUST00000220004 1266 ntBASIC8.11□□□□□ -1.11
NcanP55066 AC163667.1-201ENSMUST00000225201 1289 ntBASIC8.11□□□□□ -1.11
NcanP55066 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
NcanP55066 4930546K05Rik-202ENSMUST00000216586 3539 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NcanP55066 AC155270.1-201ENSMUST00000221626 4028 ntBASIC8.11□□□□□ -1.11
NcanP55066 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NcanP55066 Gm6150-202ENSMUST00000219888 2977 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NcanP55066 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
NcanP55066 AA986860-201ENSMUST00000039323 2909 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NcanP55066 Ttf2-201ENSMUST00000076941 4541 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NcanP55066 Scn8a-213ENSMUST00000201549 7120 ntAPPRIS P5 TSL 5 BASIC8.11□□□□□ -1.11
NcanP55066 Psmd10-201ENSMUST00000033805 1430 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
NcanP55066 Gm42546-201ENSMUST00000201584 2592 ntBASIC8.11□□□□□ -1.11
NcanP55066 Prom1-202ENSMUST00000074113 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
NcanP55066 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC8.1□□□□□ -1.11
NcanP55066 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
NcanP55066 Slc13a2os-201ENSMUST00000149865 3627 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
NcanP55066 Olfr943-202ENSMUST00000213176 8275 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
NcanP55066 Gm15601-201ENSMUST00000122972 4033 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
NcanP55066 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
NcanP55066 Chordc1-201ENSMUST00000001825 5789 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
NcanP55066 Inpp1-201ENSMUST00000027271 5767 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
NcanP55066 Cfap58-201ENSMUST00000066308 3345 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
NcanP55066 Olfr981-202ENSMUST00000215956 8197 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
NcanP55066 Nrxn3-201ENSMUST00000057634 4634 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
NcanP55066 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
NcanP55066 Ednra-201ENSMUST00000034029 3625 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
NcanP55066 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
NcanP55066 Elmo2-205ENSMUST00000103091 4695 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
NcanP55066 n-R5s178-201ENSMUST00000104249 114 ntBASIC8.1□□□□□ -1.11
NcanP55066 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
NcanP55066 Gm16073-201ENSMUST00000116032 517 ntBASIC8.1□□□□□ -1.11
NcanP55066 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
NcanP55066 Gm14116-201ENSMUST00000117733 805 ntBASIC8.1□□□□□ -1.11
NcanP55066 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
NcanP55066 Gm27360-201ENSMUST00000183487 80 ntBASIC8.1□□□□□ -1.11
NcanP55066 Gm27804-201ENSMUST00000185135 119 ntBASIC8.1□□□□□ -1.11
NcanP55066 Gm7804-202ENSMUST00000194187 854 ntBASIC8.1□□□□□ -1.11
NcanP55066 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC8.1□□□□□ -1.11
NcanP55066 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
NcanP55066 Gm17995-201ENSMUST00000209266 530 ntBASIC8.1□□□□□ -1.11
NcanP55066 Gm45478-201ENSMUST00000209472 211 ntBASIC8.1□□□□□ -1.11
NcanP55066 Gm19217-201ENSMUST00000218238 328 ntBASIC8.1□□□□□ -1.11
NcanP55066 CT030166.4-201ENSMUST00000220640 404 ntBASIC8.1□□□□□ -1.11
NcanP55066 Gm9280-201ENSMUST00000223155 517 ntBASIC8.1□□□□□ -1.11
NcanP55066 AC124489.1-201ENSMUST00000225852 526 ntBASIC8.1□□□□□ -1.11
NcanP55066 AC110176.1-201ENSMUST00000226219 504 ntBASIC8.1□□□□□ -1.11
NcanP55066 AC102139.1-201ENSMUST00000227000 251 ntBASIC8.1□□□□□ -1.11
NcanP55066 AC123917.1-201ENSMUST00000228063 1048 ntBASIC8.1□□□□□ -1.11
NcanP55066 Sun3-201ENSMUST00000043377 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 98 ms