Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Kif1b-201ENSMUST00000030806 6991 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col1a1P11087 D430042O09Rik-201ENSMUST00000069660 6148 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Col1a1P11087 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC8.83□□□□□ -1
Col1a1P11087 Alms1-201ENSMUST00000072018 9986 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Col1a1P11087 Ttc28-206ENSMUST00000156290 10688 ntAPPRIS P2 TSL 5 BASIC8.83□□□□□ -1
Col1a1P11087 C87436-202ENSMUST00000113698 2922 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col1a1P11087 Npr3-204ENSMUST00000228489 1969 ntBASIC8.83□□□□□ -1
Col1a1P11087 Slc34a1-205ENSMUST00000225259 3983 ntAPPRIS P1 BASIC8.83□□□□□ -1
Col1a1P11087 Pah-201ENSMUST00000020241 2142 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col1a1P11087 Washc2-201ENSMUST00000036759 4307 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col1a1P11087 Musk-203ENSMUST00000098057 3422 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col1a1P11087 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col1a1P11087 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC8.83□□□□□ -1
Col1a1P11087 Gm22707-201ENSMUST00000103834 110 ntBASIC8.83□□□□□ -1
Col1a1P11087 Gm2735-201ENSMUST00000136133 277 ntBASIC8.83□□□□□ -1
Col1a1P11087 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC8.83□□□□□ -1
Col1a1P11087 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC8.83□□□□□ -1
Col1a1P11087 Gm18808-201ENSMUST00000173316 462 ntBASIC8.83□□□□□ -1
Col1a1P11087 Gm24812-201ENSMUST00000175315 284 ntBASIC8.83□□□□□ -1
Col1a1P11087 Gm26784-201ENSMUST00000181666 410 ntBASIC8.83□□□□□ -1
Col1a1P11087 Mir7033-201ENSMUST00000184259 81 ntBASIC8.83□□□□□ -1
Col1a1P11087 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col1a1P11087 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col1a1P11087 Gm43063-201ENSMUST00000198198 1081 ntBASIC8.83□□□□□ -1
Col1a1P11087 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC8.83□□□□□ -1
Col1a1P11087 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC8.83□□□□□ -1
Col1a1P11087 AC144783.1-201ENSMUST00000219103 960 ntBASIC8.83□□□□□ -1
Col1a1P11087 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC8.83□□□□□ -1
Col1a1P11087 AC114008.1-201ENSMUST00000226193 937 ntBASIC8.83□□□□□ -1
Col1a1P11087 CT010453.2-201ENSMUST00000227005 483 ntBASIC8.83□□□□□ -1
Col1a1P11087 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col1a1P11087 Gm23734-201ENSMUST00000083753 109 ntBASIC8.83□□□□□ -1
Col1a1P11087 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col1a1P11087 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col1a1P11087 Rgs19-206ENSMUST00000108778 1427 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col1a1P11087 Rgs19-212ENSMUST00000165416 1427 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col1a1P11087 Pdgfra-208ENSMUST00000202681 2876 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col1a1P11087 Gm45056-201ENSMUST00000208140 3462 ntTSL 5 BASIC8.82□□□□□ -1
Col1a1P11087 Gm38001-201ENSMUST00000192900 3761 ntBASIC8.82□□□□□ -1
Col1a1P11087 Mkl2-201ENSMUST00000009713 5815 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Col1a1P11087 Gm29028-201ENSMUST00000186297 2166 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col1a1P11087 Gm28352-201ENSMUST00000186654 2167 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col1a1P11087 Gm29654-201ENSMUST00000186886 2169 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col1a1P11087 Gm28226-201ENSMUST00000186916 2169 ntTSL 5 BASIC8.82□□□□□ -1
Col1a1P11087 Gm28972-201ENSMUST00000186990 2167 ntTSL 5 BASIC8.82□□□□□ -1
Col1a1P11087 Gm29302-201ENSMUST00000187209 2167 ntTSL 5 BASIC8.82□□□□□ -1
Col1a1P11087 Gm28866-201ENSMUST00000187298 2167 ntTSL 5 BASIC8.82□□□□□ -1
Col1a1P11087 Gm28878-201ENSMUST00000188272 2167 ntTSL 5 BASIC8.82□□□□□ -1
Col1a1P11087 Gm28246-201ENSMUST00000188308 2167 ntTSL 5 BASIC8.82□□□□□ -1
Col1a1P11087 Gm28823-201ENSMUST00000188540 2167 ntTSL 5 BASIC8.82□□□□□ -1
Col1a1P11087 Gm29046-201ENSMUST00000188653 2167 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col1a1P11087 Gm28346-201ENSMUST00000189021 2167 ntTSL 5 BASIC8.82□□□□□ -1
Col1a1P11087 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Col1a1P11087 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC8.82□□□□□ -1
Col1a1P11087 Wfdc5-201ENSMUST00000045127 2322 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col1a1P11087 Nlrc5-207ENSMUST00000211816 7578 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Col1a1P11087 Olfr314-202ENSMUST00000205189 2647 ntAPPRIS P1 TSL 3 BASIC8.82□□□□□ -1
Col1a1P11087 Rpgr-206ENSMUST00000115534 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Col1a1P11087 Stat1-205ENSMUST00000186574 2834 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
Col1a1P11087 Pcdh15-228ENSMUST00000152819 2867 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col1a1P11087 Fam168a-202ENSMUST00000107042 6388 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col1a1P11087 Plekhg1-202ENSMUST00000120274 7369 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Col1a1P11087 Coq8a-217ENSMUST00000170472 3928 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col1a1P11087 Adamtsl1-203ENSMUST00000107178 7839 ntAPPRIS P2 TSL 5 BASIC8.82□□□□□ -1
Col1a1P11087 Rab2b-202ENSMUST00000100631 2619 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col1a1P11087 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col1a1P11087 Gm12939-201ENSMUST00000117303 165 ntBASIC8.82□□□□□ -1
Col1a1P11087 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC8.82□□□□□ -1
Col1a1P11087 Gm5843-201ENSMUST00000121631 476 ntBASIC8.82□□□□□ -1
Col1a1P11087 Adgrb3-205ENSMUST00000135518 5432 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Col1a1P11087 Gm16284-201ENSMUST00000140995 400 ntBASIC8.82□□□□□ -1
Col1a1P11087 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC8.82□□□□□ -1
Col1a1P11087 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col1a1P11087 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC8.82□□□□□ -1
Col1a1P11087 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC8.82□□□□□ -1
Col1a1P11087 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC8.82□□□□□ -1
Col1a1P11087 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC8.82□□□□□ -1
Col1a1P11087 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC8.82□□□□□ -1
Col1a1P11087 Gm7690-201ENSMUST00000190885 1399 ntBASIC8.82□□□□□ -1
Col1a1P11087 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Col1a1P11087 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col1a1P11087 Grk1-202ENSMUST00000209909 7431 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Col1a1P11087 Gm7351-201ENSMUST00000210745 580 ntBASIC8.82□□□□□ -1
Col1a1P11087 Gm18726-201ENSMUST00000218175 2010 ntBASIC8.82□□□□□ -1
Col1a1P11087 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col1a1P11087 Grk1-201ENSMUST00000033827 7425 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col1a1P11087 Fbxw10-201ENSMUST00000036085 3354 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Col1a1P11087 Acsm5-201ENSMUST00000066465 2981 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col1a1P11087 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC8.82□□□□□ -1
Col1a1P11087 Aplnr-201ENSMUST00000057019 3699 ntAPPRIS P1 BASIC8.81□□□□□ -1
Col1a1P11087 Kalrn-204ENSMUST00000114949 3618 ntTSL 5 BASIC8.81□□□□□ -1
Col1a1P11087 Rnf19a-203ENSMUST00000228358 3452 ntBASIC8.81□□□□□ -1
Col1a1P11087 Tbc1d24-202ENSMUST00000040474 6269 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col1a1P11087 Kif1a-204ENSMUST00000171796 8206 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col1a1P11087 Gm2108-201ENSMUST00000165058 2177 ntBASIC8.81□□□□□ -1
Col1a1P11087 Pla2g4d-201ENSMUST00000094665 3688 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col1a1P11087 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col1a1P11087 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Col1a1P11087 Abr-204ENSMUST00000108407 4811 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col1a1P11087 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms