Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rif1Q6PR54 Gm18639-201ENSMUST00000210442 1769 ntBASIC6.62□□□□□ -1.35
Rif1Q6PR54 Il12b-202ENSMUST00000170513 1944 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Rif1Q6PR54 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC6.62□□□□□ -1.35
Rif1Q6PR54 Gm7942-201ENSMUST00000163216 1500 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Rif1Q6PR54 Cldn34c1-202ENSMUST00000113348 3281 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rif1Q6PR54 Pilrb2-201ENSMUST00000164886 1807 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rif1Q6PR54 Kidins220-202ENSMUST00000220459 5381 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rif1Q6PR54 5031434C07Rik-201ENSMUST00000053559 2894 ntTSL 5 BASIC6.62□□□□□ -1.35
Rif1Q6PR54 Pcdhb3-201ENSMUST00000051754 3787 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Gm23437-201ENSMUST00000104036 127 ntBASIC6.61□□□□□ -1.35
Rif1Q6PR54 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Gm13545-201ENSMUST00000119044 482 ntBASIC6.61□□□□□ -1.35
Rif1Q6PR54 Gm14855-201ENSMUST00000119925 192 ntBASIC6.61□□□□□ -1.35
Rif1Q6PR54 Gm16523-201ENSMUST00000121253 592 ntBASIC6.61□□□□□ -1.35
Rif1Q6PR54 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Cphx2-201ENSMUST00000168149 1710 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Gm10012-202ENSMUST00000170379 372 ntBASIC6.61□□□□□ -1.35
Rif1Q6PR54 Gm27216-202ENSMUST00000184100 635 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Cphx3-202ENSMUST00000184577 1714 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Gm29371-201ENSMUST00000186823 885 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Park2-209ENSMUST00000191124 3202 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Gm44018-201ENSMUST00000204471 407 ntBASIC6.61□□□□□ -1.35
Rif1Q6PR54 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Gm35638-201ENSMUST00000220724 652 ntBASIC6.61□□□□□ -1.35
Rif1Q6PR54 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Myh10-202ENSMUST00000092984 7759 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Sox6-203ENSMUST00000166207 2825 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Adgrb3-205ENSMUST00000135518 5432 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Tdpoz1-201ENSMUST00000094413 2237 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Rif1Q6PR54 1700019C18Rik-203ENSMUST00000222085 1766 ntTSL 5 BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Tsnaxip1-203ENSMUST00000212566 1993 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Dclk1-201ENSMUST00000054237 7847 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Ypel2-201ENSMUST00000018571 4847 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Zfp940-201ENSMUST00000085792 2764 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Thsd1-203ENSMUST00000162447 3273 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Ccdc127-203ENSMUST00000160021 2682 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Nron-203ENSMUST00000156297 3340 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Eny2-201ENSMUST00000060652 3000 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Pcdhga1-202ENSMUST00000194888 3247 ntAPPRIS ALT2 BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Gm44848-201ENSMUST00000207808 3234 ntBASIC6.61□□□□□ -1.35
Rif1Q6PR54 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Olfr1374-ps1-201ENSMUST00000120114 936 ntBASIC6.61□□□□□ -1.35
Rif1Q6PR54 Gm15181-201ENSMUST00000120142 177 ntBASIC6.61□□□□□ -1.35
Rif1Q6PR54 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Snora47-201ENSMUST00000157483 138 ntBASIC6.61□□□□□ -1.35
Rif1Q6PR54 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Gm38097-201ENSMUST00000192936 439 ntBASIC6.61□□□□□ -1.35
Rif1Q6PR54 Gm31861-201ENSMUST00000204563 672 ntBASIC6.61□□□□□ -1.35
Rif1Q6PR54 Gm4800-201ENSMUST00000215776 1266 ntBASIC6.61□□□□□ -1.35
Rif1Q6PR54 CT009556.2-201ENSMUST00000227980 1123 ntBASIC6.61□□□□□ -1.35
Rif1Q6PR54 Olfr77-201ENSMUST00000057596 9649 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Sv2c-201ENSMUST00000161263 9101 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Fshb-201ENSMUST00000028533 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Stat1-206ENSMUST00000186857 4241 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Lyn-202ENSMUST00000103010 3387 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Cfap61-202ENSMUST00000118002 3230 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Golga3-201ENSMUST00000031477 4805 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Kprp-201ENSMUST00000072363 2729 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Gm38215-201ENSMUST00000192321 2233 ntBASIC6.61□□□□□ -1.35
Rif1Q6PR54 Baalc-201ENSMUST00000163313 2492 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rif1Q6PR54 E330035G20Rik-201ENSMUST00000221094 3002 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Ints10-202ENSMUST00000070713 4192 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Ppp2r3c-201ENSMUST00000021410 4216 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Acmsd-201ENSMUST00000038006 2717 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rif1Q6PR54 Ddx1-201ENSMUST00000071103 4842 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Birc5-202ENSMUST00000093906 3334 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Akap1-202ENSMUST00000107903 3721 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Gm4890-201ENSMUST00000181030 3784 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Gm45718-201ENSMUST00000207577 3794 ntBASIC6.6□□□□□ -1.35
Rif1Q6PR54 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Gm11445-201ENSMUST00000119101 532 ntBASIC6.6□□□□□ -1.35
Rif1Q6PR54 Gm13130-201ENSMUST00000119195 1166 ntBASIC6.6□□□□□ -1.35
Rif1Q6PR54 Gm6987-201ENSMUST00000119319 428 ntBASIC6.6□□□□□ -1.35
Rif1Q6PR54 Rhox3g-201ENSMUST00000119965 991 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Rif1Q6PR54 Gm13649-201ENSMUST00000122325 606 ntBASIC6.6□□□□□ -1.35
Rif1Q6PR54 Gm26086-201ENSMUST00000157902 263 ntBASIC6.6□□□□□ -1.35
Rif1Q6PR54 Gm22728-201ENSMUST00000158087 129 ntBASIC6.6□□□□□ -1.35
Rif1Q6PR54 Gm25837-201ENSMUST00000158919 108 ntBASIC6.6□□□□□ -1.35
Rif1Q6PR54 Gm2866-201ENSMUST00000166053 481 ntBASIC6.6□□□□□ -1.35
Rif1Q6PR54 Gm17074-201ENSMUST00000167284 556 ntBASIC6.6□□□□□ -1.35
Rif1Q6PR54 Gm5698-201ENSMUST00000178317 724 ntBASIC6.6□□□□□ -1.35
Rif1Q6PR54 Gm26817-201ENSMUST00000180446 339 ntBASIC6.6□□□□□ -1.35
Rif1Q6PR54 Gm8609-201ENSMUST00000182967 998 ntBASIC6.6□□□□□ -1.35
Rif1Q6PR54 Ighv8-3-201ENSMUST00000194985 295 ntBASIC6.6□□□□□ -1.35
Rif1Q6PR54 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Rif1Q6PR54 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC6.6□□□□□ -1.35
Rif1Q6PR54 AC152922.1-201ENSMUST00000216518 1232 ntBASIC6.6□□□□□ -1.35
Rif1Q6PR54 Gm19810-201ENSMUST00000218521 251 ntBASIC6.6□□□□□ -1.35
Rif1Q6PR54 Gm6056-201ENSMUST00000221253 488 ntBASIC6.6□□□□□ -1.35
Rif1Q6PR54 AC154461.4-201ENSMUST00000224878 468 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 96.3 ms