Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Upk1bQ9Z2C6 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Upk1bQ9Z2C6 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Upk1bQ9Z2C6 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Upk1bQ9Z2C6 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Upk1bQ9Z2C6 Gm9959-201ENSMUST00000068277 390 ntBASIC17.25■□□□□ 0.35
Upk1bQ9Z2C6 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Upk1bQ9Z2C6 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.24■□□□□ 0.35
Upk1bQ9Z2C6 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.24■□□□□ 0.35
Upk1bQ9Z2C6 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Upk1bQ9Z2C6 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Upk1bQ9Z2C6 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Upk1bQ9Z2C6 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Upk1bQ9Z2C6 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.24■□□□□ 0.35
Upk1bQ9Z2C6 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
Upk1bQ9Z2C6 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Upk1bQ9Z2C6 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Upk1bQ9Z2C6 Gm5812-201ENSMUST00000061073 957 ntBASIC17.24■□□□□ 0.35
Upk1bQ9Z2C6 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.24■□□□□ 0.35
Upk1bQ9Z2C6 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Upk1bQ9Z2C6 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Upk1bQ9Z2C6 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Upk1bQ9Z2C6 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Upk1bQ9Z2C6 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Upk1bQ9Z2C6 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Upk1bQ9Z2C6 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Upk1bQ9Z2C6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Upk1bQ9Z2C6 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Upk1bQ9Z2C6 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Upk1bQ9Z2C6 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Upk1bQ9Z2C6 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Upk1bQ9Z2C6 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.23■□□□□ 0.35
Upk1bQ9Z2C6 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Upk1bQ9Z2C6 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Upk1bQ9Z2C6 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Upk1bQ9Z2C6 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Upk1bQ9Z2C6 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Upk1bQ9Z2C6 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Upk1bQ9Z2C6 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Upk1bQ9Z2C6 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Upk1bQ9Z2C6 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Upk1bQ9Z2C6 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Upk1bQ9Z2C6 Gm15546-201ENSMUST00000122095 826 ntBASIC17.22■□□□□ 0.35
Upk1bQ9Z2C6 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Upk1bQ9Z2C6 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Upk1bQ9Z2C6 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Upk1bQ9Z2C6 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Upk1bQ9Z2C6 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Upk1bQ9Z2C6 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Upk1bQ9Z2C6 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.21■□□□□ 0.35
Upk1bQ9Z2C6 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Upk1bQ9Z2C6 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Upk1bQ9Z2C6 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Upk1bQ9Z2C6 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.21■□□□□ 0.35
Upk1bQ9Z2C6 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Upk1bQ9Z2C6 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Upk1bQ9Z2C6 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Upk1bQ9Z2C6 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Upk1bQ9Z2C6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Upk1bQ9Z2C6 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Upk1bQ9Z2C6 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Upk1bQ9Z2C6 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.21■□□□□ 0.35
Upk1bQ9Z2C6 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Upk1bQ9Z2C6 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Upk1bQ9Z2C6 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Upk1bQ9Z2C6 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Upk1bQ9Z2C6 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Upk1bQ9Z2C6 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Upk1bQ9Z2C6 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Upk1bQ9Z2C6 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Upk1bQ9Z2C6 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upk1bQ9Z2C6 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Upk1bQ9Z2C6 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upk1bQ9Z2C6 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Upk1bQ9Z2C6 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upk1bQ9Z2C6 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upk1bQ9Z2C6 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Upk1bQ9Z2C6 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.2■□□□□ 0.34
Upk1bQ9Z2C6 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.2■□□□□ 0.34
Upk1bQ9Z2C6 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.2■□□□□ 0.34
Upk1bQ9Z2C6 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.2■□□□□ 0.34
Upk1bQ9Z2C6 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upk1bQ9Z2C6 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.2■□□□□ 0.34
Upk1bQ9Z2C6 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.2■□□□□ 0.34
Upk1bQ9Z2C6 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upk1bQ9Z2C6 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upk1bQ9Z2C6 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upk1bQ9Z2C6 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upk1bQ9Z2C6 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.19■□□□□ 0.34
Upk1bQ9Z2C6 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.19■□□□□ 0.34
Upk1bQ9Z2C6 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upk1bQ9Z2C6 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upk1bQ9Z2C6 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Upk1bQ9Z2C6 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Upk1bQ9Z2C6 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upk1bQ9Z2C6 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Upk1bQ9Z2C6 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Upk1bQ9Z2C6 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upk1bQ9Z2C6 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.19■□□□□ 0.34
Upk1bQ9Z2C6 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms