Protein–RNA interactions for Protein: Q9Z0M3

Cdh20, Cadherin-20, mousemouse

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh20Q9Z0M3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh20Q9Z0M3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Cdh20Q9Z0M3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh20Q9Z0M3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cdh20Q9Z0M3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdh20Q9Z0M3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdh20Q9Z0M3 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.22■□□□□ 0.35
Cdh20Q9Z0M3 Gm42778-201ENSMUST00000199644 553 ntBASIC17.22■□□□□ 0.35
Cdh20Q9Z0M3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Cdh20Q9Z0M3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdh20Q9Z0M3 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdh20Q9Z0M3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdh20Q9Z0M3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdh20Q9Z0M3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdh20Q9Z0M3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdh20Q9Z0M3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cdh20Q9Z0M3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdh20Q9Z0M3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Cdh20Q9Z0M3 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdh20Q9Z0M3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdh20Q9Z0M3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdh20Q9Z0M3 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdh20Q9Z0M3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Cdh20Q9Z0M3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.21■□□□□ 0.35
Cdh20Q9Z0M3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdh20Q9Z0M3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdh20Q9Z0M3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdh20Q9Z0M3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdh20Q9Z0M3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdh20Q9Z0M3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cdh20Q9Z0M3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Cdh20Q9Z0M3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.2■□□□□ 0.34
Cdh20Q9Z0M3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdh20Q9Z0M3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdh20Q9Z0M3 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdh20Q9Z0M3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Cdh20Q9Z0M3 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cdh20Q9Z0M3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh20Q9Z0M3 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.19■□□□□ 0.34
Cdh20Q9Z0M3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh20Q9Z0M3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh20Q9Z0M3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh20Q9Z0M3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh20Q9Z0M3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh20Q9Z0M3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh20Q9Z0M3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh20Q9Z0M3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh20Q9Z0M3 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.19■□□□□ 0.34
Cdh20Q9Z0M3 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.19■□□□□ 0.34
Cdh20Q9Z0M3 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.19■□□□□ 0.34
Cdh20Q9Z0M3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh20Q9Z0M3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh20Q9Z0M3 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh20Q9Z0M3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh20Q9Z0M3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh20Q9Z0M3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.18■□□□□ 0.34
Cdh20Q9Z0M3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh20Q9Z0M3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh20Q9Z0M3 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh20Q9Z0M3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh20Q9Z0M3 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Cdh20Q9Z0M3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh20Q9Z0M3 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh20Q9Z0M3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.18■□□□□ 0.34
Cdh20Q9Z0M3 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh20Q9Z0M3 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh20Q9Z0M3 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh20Q9Z0M3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh20Q9Z0M3 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.18■□□□□ 0.34
Cdh20Q9Z0M3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh20Q9Z0M3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.18■□□□□ 0.34
Cdh20Q9Z0M3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh20Q9Z0M3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh20Q9Z0M3 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh20Q9Z0M3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh20Q9Z0M3 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Cdh20Q9Z0M3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh20Q9Z0M3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.17■□□□□ 0.34
Cdh20Q9Z0M3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Cdh20Q9Z0M3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh20Q9Z0M3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh20Q9Z0M3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh20Q9Z0M3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Cdh20Q9Z0M3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh20Q9Z0M3 Gm13534-201ENSMUST00000121169 513 ntBASIC17.17■□□□□ 0.34
Cdh20Q9Z0M3 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.17■□□□□ 0.34
Cdh20Q9Z0M3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.17■□□□□ 0.34
Cdh20Q9Z0M3 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.17■□□□□ 0.34
Cdh20Q9Z0M3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh20Q9Z0M3 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh20Q9Z0M3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Cdh20Q9Z0M3 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh20Q9Z0M3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh20Q9Z0M3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cdh20Q9Z0M3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Cdh20Q9Z0M3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.16■□□□□ 0.34
Cdh20Q9Z0M3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh20Q9Z0M3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh20Q9Z0M3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh20Q9Z0M3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms