Protein–RNA interactions for Protein: Q9DCR2

Ap3s1, AP-3 complex subunit sigma-1, mousemouse

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3s1Q9DCR2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ap3s1Q9DCR2 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ap3s1Q9DCR2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.61■□□□□ 0.25
Ap3s1Q9DCR2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ap3s1Q9DCR2 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ap3s1Q9DCR2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ap3s1Q9DCR2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ap3s1Q9DCR2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.61■□□□□ 0.25
Ap3s1Q9DCR2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ap3s1Q9DCR2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ap3s1Q9DCR2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ap3s1Q9DCR2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ap3s1Q9DCR2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.6■□□□□ 0.25
Ap3s1Q9DCR2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ap3s1Q9DCR2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ap3s1Q9DCR2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.6■□□□□ 0.25
Ap3s1Q9DCR2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.6■□□□□ 0.25
Ap3s1Q9DCR2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.6■□□□□ 0.25
Ap3s1Q9DCR2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ap3s1Q9DCR2 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ap3s1Q9DCR2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ap3s1Q9DCR2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ap3s1Q9DCR2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ap3s1Q9DCR2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ap3s1Q9DCR2 Fst-202ENSMUST00000223640 2612 ntBASIC16.6■□□□□ 0.25
Ap3s1Q9DCR2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ap3s1Q9DCR2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ap3s1Q9DCR2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ap3s1Q9DCR2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ap3s1Q9DCR2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ap3s1Q9DCR2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ap3s1Q9DCR2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ap3s1Q9DCR2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ap3s1Q9DCR2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ap3s1Q9DCR2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.59■□□□□ 0.25
Ap3s1Q9DCR2 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.59■□□□□ 0.25
Ap3s1Q9DCR2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ap3s1Q9DCR2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ap3s1Q9DCR2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ap3s1Q9DCR2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ap3s1Q9DCR2 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ap3s1Q9DCR2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ap3s1Q9DCR2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ap3s1Q9DCR2 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ap3s1Q9DCR2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ap3s1Q9DCR2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ap3s1Q9DCR2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ap3s1Q9DCR2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.58■□□□□ 0.25
Ap3s1Q9DCR2 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ap3s1Q9DCR2 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Ap3s1Q9DCR2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ap3s1Q9DCR2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ap3s1Q9DCR2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ap3s1Q9DCR2 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ap3s1Q9DCR2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ap3s1Q9DCR2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ap3s1Q9DCR2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ap3s1Q9DCR2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ap3s1Q9DCR2 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Ap3s1Q9DCR2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ap3s1Q9DCR2 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ap3s1Q9DCR2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ap3s1Q9DCR2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ap3s1Q9DCR2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ap3s1Q9DCR2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ap3s1Q9DCR2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ap3s1Q9DCR2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
Ap3s1Q9DCR2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.57■□□□□ 0.24
Ap3s1Q9DCR2 Gm12366-201ENSMUST00000121722 873 ntBASIC16.57■□□□□ 0.24
Ap3s1Q9DCR2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.57■□□□□ 0.24
Ap3s1Q9DCR2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ap3s1Q9DCR2 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.57■□□□□ 0.24
Ap3s1Q9DCR2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.57■□□□□ 0.24
Ap3s1Q9DCR2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.57■□□□□ 0.24
Ap3s1Q9DCR2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.57■□□□□ 0.24
Ap3s1Q9DCR2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.57■□□□□ 0.24
Ap3s1Q9DCR2 Gm5786-201ENSMUST00000085368 882 ntBASIC16.57■□□□□ 0.24
Ap3s1Q9DCR2 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ap3s1Q9DCR2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ap3s1Q9DCR2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ap3s1Q9DCR2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ap3s1Q9DCR2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ap3s1Q9DCR2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ap3s1Q9DCR2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ap3s1Q9DCR2 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ap3s1Q9DCR2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ap3s1Q9DCR2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.56■□□□□ 0.24
Ap3s1Q9DCR2 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ap3s1Q9DCR2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ap3s1Q9DCR2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.56■□□□□ 0.24
Ap3s1Q9DCR2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ap3s1Q9DCR2 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Ap3s1Q9DCR2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ap3s1Q9DCR2 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.55■□□□□ 0.24
Ap3s1Q9DCR2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ap3s1Q9DCR2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ap3s1Q9DCR2 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.55■□□□□ 0.24
Ap3s1Q9DCR2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ap3s1Q9DCR2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ap3s1Q9DCR2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms