Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Shmt2Q9CZN7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Shmt2Q9CZN7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Shmt2Q9CZN7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Shmt2Q9CZN7 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.73■□□□□ 0.43
Shmt2Q9CZN7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Shmt2Q9CZN7 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shmt2Q9CZN7 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Shmt2Q9CZN7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.73■□□□□ 0.43
Shmt2Q9CZN7 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shmt2Q9CZN7 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.73■□□□□ 0.43
Shmt2Q9CZN7 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shmt2Q9CZN7 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shmt2Q9CZN7 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Shmt2Q9CZN7 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shmt2Q9CZN7 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shmt2Q9CZN7 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Shmt2Q9CZN7 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shmt2Q9CZN7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shmt2Q9CZN7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shmt2Q9CZN7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Shmt2Q9CZN7 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.72■□□□□ 0.43
Shmt2Q9CZN7 Gm5874-201ENSMUST00000096101 508 ntBASIC17.72■□□□□ 0.43
Shmt2Q9CZN7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shmt2Q9CZN7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Shmt2Q9CZN7 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shmt2Q9CZN7 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shmt2Q9CZN7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shmt2Q9CZN7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shmt2Q9CZN7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Shmt2Q9CZN7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.71■□□□□ 0.43
Shmt2Q9CZN7 Gm8495-201ENSMUST00000188740 694 ntBASIC17.71■□□□□ 0.43
Shmt2Q9CZN7 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shmt2Q9CZN7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shmt2Q9CZN7 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shmt2Q9CZN7 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Shmt2Q9CZN7 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Shmt2Q9CZN7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shmt2Q9CZN7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Shmt2Q9CZN7 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Shmt2Q9CZN7 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shmt2Q9CZN7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Shmt2Q9CZN7 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shmt2Q9CZN7 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shmt2Q9CZN7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Shmt2Q9CZN7 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.7■□□□□ 0.42
Shmt2Q9CZN7 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.7■□□□□ 0.42
Shmt2Q9CZN7 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.7■□□□□ 0.42
Shmt2Q9CZN7 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shmt2Q9CZN7 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Shmt2Q9CZN7 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.7■□□□□ 0.42
Shmt2Q9CZN7 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Shmt2Q9CZN7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shmt2Q9CZN7 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shmt2Q9CZN7 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Shmt2Q9CZN7 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shmt2Q9CZN7 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Shmt2Q9CZN7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Shmt2Q9CZN7 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Shmt2Q9CZN7 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.69■□□□□ 0.42
Shmt2Q9CZN7 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Shmt2Q9CZN7 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.69■□□□□ 0.42
Shmt2Q9CZN7 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shmt2Q9CZN7 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shmt2Q9CZN7 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shmt2Q9CZN7 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shmt2Q9CZN7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shmt2Q9CZN7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shmt2Q9CZN7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shmt2Q9CZN7 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shmt2Q9CZN7 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.68■□□□□ 0.42
Shmt2Q9CZN7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shmt2Q9CZN7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shmt2Q9CZN7 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shmt2Q9CZN7 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shmt2Q9CZN7 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Shmt2Q9CZN7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Shmt2Q9CZN7 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.68■□□□□ 0.42
Shmt2Q9CZN7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shmt2Q9CZN7 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Shmt2Q9CZN7 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shmt2Q9CZN7 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Shmt2Q9CZN7 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.68■□□□□ 0.42
Shmt2Q9CZN7 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Shmt2Q9CZN7 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shmt2Q9CZN7 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shmt2Q9CZN7 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.67■□□□□ 0.42
Shmt2Q9CZN7 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shmt2Q9CZN7 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shmt2Q9CZN7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shmt2Q9CZN7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shmt2Q9CZN7 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shmt2Q9CZN7 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Shmt2Q9CZN7 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Shmt2Q9CZN7 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shmt2Q9CZN7 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shmt2Q9CZN7 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shmt2Q9CZN7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.66■□□□□ 0.42
Shmt2Q9CZN7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Shmt2Q9CZN7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms