Protein–RNA interactions for Protein: Q9CPW3

Mrpl54, 39S ribosomal protein L54, mitochondrial, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl54Q9CPW3 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Mrpl54Q9CPW3 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Mrpl54Q9CPW3 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Mrpl54Q9CPW3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.53■□□□□ 0.24
Mrpl54Q9CPW3 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Mrpl54Q9CPW3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.53■□□□□ 0.24
Mrpl54Q9CPW3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Mrpl54Q9CPW3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Mrpl54Q9CPW3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.53■□□□□ 0.24
Mrpl54Q9CPW3 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Mrpl54Q9CPW3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Mrpl54Q9CPW3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.53■□□□□ 0.24
Mrpl54Q9CPW3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.53■□□□□ 0.24
Mrpl54Q9CPW3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.53■□□□□ 0.24
Mrpl54Q9CPW3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.53■□□□□ 0.24
Mrpl54Q9CPW3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Mrpl54Q9CPW3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Mrpl54Q9CPW3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Mrpl54Q9CPW3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Mrpl54Q9CPW3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Mrpl54Q9CPW3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Mrpl54Q9CPW3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Mrpl54Q9CPW3 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Mrpl54Q9CPW3 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Mrpl54Q9CPW3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Mrpl54Q9CPW3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Mrpl54Q9CPW3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Mrpl54Q9CPW3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Mrpl54Q9CPW3 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.52■□□□□ 0.24
Mrpl54Q9CPW3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.52■□□□□ 0.24
Mrpl54Q9CPW3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Mrpl54Q9CPW3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Mrpl54Q9CPW3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mrpl54Q9CPW3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Mrpl54Q9CPW3 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mrpl54Q9CPW3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mrpl54Q9CPW3 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Mrpl54Q9CPW3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC16.51■□□□□ 0.23
Mrpl54Q9CPW3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mrpl54Q9CPW3 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Mrpl54Q9CPW3 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mrpl54Q9CPW3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mrpl54Q9CPW3 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mrpl54Q9CPW3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Mrpl54Q9CPW3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mrpl54Q9CPW3 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mrpl54Q9CPW3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Mrpl54Q9CPW3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mrpl54Q9CPW3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Mrpl54Q9CPW3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Mrpl54Q9CPW3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mrpl54Q9CPW3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mrpl54Q9CPW3 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mrpl54Q9CPW3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mrpl54Q9CPW3 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mrpl54Q9CPW3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Mrpl54Q9CPW3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Mrpl54Q9CPW3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mrpl54Q9CPW3 Gm45444-201ENSMUST00000211394 898 ntBASIC16.5■□□□□ 0.23
Mrpl54Q9CPW3 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Mrpl54Q9CPW3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.5■□□□□ 0.23
Mrpl54Q9CPW3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mrpl54Q9CPW3 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mrpl54Q9CPW3 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Mrpl54Q9CPW3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mrpl54Q9CPW3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mrpl54Q9CPW3 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mrpl54Q9CPW3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mrpl54Q9CPW3 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mrpl54Q9CPW3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mrpl54Q9CPW3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Mrpl54Q9CPW3 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mrpl54Q9CPW3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mrpl54Q9CPW3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mrpl54Q9CPW3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mrpl54Q9CPW3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mrpl54Q9CPW3 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mrpl54Q9CPW3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mrpl54Q9CPW3 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Mrpl54Q9CPW3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mrpl54Q9CPW3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Mrpl54Q9CPW3 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mrpl54Q9CPW3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mrpl54Q9CPW3 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Mrpl54Q9CPW3 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mrpl54Q9CPW3 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Mrpl54Q9CPW3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Mrpl54Q9CPW3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mrpl54Q9CPW3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
Mrpl54Q9CPW3 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.48■□□□□ 0.23
Mrpl54Q9CPW3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Mrpl54Q9CPW3 Serp2-204ENSMUST00000228055 705 ntBASIC16.48■□□□□ 0.23
Mrpl54Q9CPW3 Gm9870-201ENSMUST00000063874 645 ntBASIC16.48■□□□□ 0.23
Mrpl54Q9CPW3 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mrpl54Q9CPW3 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Mrpl54Q9CPW3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mrpl54Q9CPW3 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mrpl54Q9CPW3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Mrpl54Q9CPW3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mrpl54Q9CPW3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms