Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha1Q91Y21 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha1Q91Y21 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha1Q91Y21 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.4■□□□□ 0.7
Pcdha1Q91Y21 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha1Q91Y21 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha1Q91Y21 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha1Q91Y21 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdha1Q91Y21 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha1Q91Y21 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha1Q91Y21 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha1Q91Y21 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha1Q91Y21 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Pcdha1Q91Y21 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Pcdha1Q91Y21 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.39■□□□□ 0.69
Pcdha1Q91Y21 Rab3c-203ENSMUST00000224180 967 ntBASIC19.39■□□□□ 0.69
Pcdha1Q91Y21 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha1Q91Y21 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha1Q91Y21 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha1Q91Y21 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha1Q91Y21 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha1Q91Y21 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Pcdha1Q91Y21 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Pcdha1Q91Y21 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha1Q91Y21 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha1Q91Y21 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.38■□□□□ 0.69
Pcdha1Q91Y21 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.38■□□□□ 0.69
Pcdha1Q91Y21 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha1Q91Y21 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.38■□□□□ 0.69
Pcdha1Q91Y21 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha1Q91Y21 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha1Q91Y21 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.38■□□□□ 0.69
Pcdha1Q91Y21 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.38■□□□□ 0.69
Pcdha1Q91Y21 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha1Q91Y21 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha1Q91Y21 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha1Q91Y21 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Pcdha1Q91Y21 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha1Q91Y21 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha1Q91Y21 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha1Q91Y21 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.38■□□□□ 0.69
Pcdha1Q91Y21 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha1Q91Y21 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha1Q91Y21 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha1Q91Y21 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.37■□□□□ 0.69
Pcdha1Q91Y21 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha1Q91Y21 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha1Q91Y21 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.37■□□□□ 0.69
Pcdha1Q91Y21 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Pcdha1Q91Y21 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha1Q91Y21 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha1Q91Y21 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha1Q91Y21 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha1Q91Y21 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha1Q91Y21 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha1Q91Y21 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha1Q91Y21 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha1Q91Y21 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha1Q91Y21 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha1Q91Y21 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Pcdha1Q91Y21 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.37■□□□□ 0.69
Pcdha1Q91Y21 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha1Q91Y21 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha1Q91Y21 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha1Q91Y21 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha1Q91Y21 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha1Q91Y21 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Pcdha1Q91Y21 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.36■□□□□ 0.69
Pcdha1Q91Y21 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha1Q91Y21 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha1Q91Y21 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha1Q91Y21 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.35■□□□□ 0.69
Pcdha1Q91Y21 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Pcdha1Q91Y21 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha1Q91Y21 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha1Q91Y21 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha1Q91Y21 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha1Q91Y21 BC021767-201ENSMUST00000126387 1716 ntBASIC19.35■□□□□ 0.69
Pcdha1Q91Y21 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.35■□□□□ 0.69
Pcdha1Q91Y21 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Pcdha1Q91Y21 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Pcdha1Q91Y21 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Pcdha1Q91Y21 Golph3-205ENSMUST00000228671 2842 ntBASIC19.35■□□□□ 0.69
Pcdha1Q91Y21 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha1Q91Y21 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha1Q91Y21 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha1Q91Y21 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha1Q91Y21 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha1Q91Y21 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha1Q91Y21 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha1Q91Y21 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Pcdha1Q91Y21 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha1Q91Y21 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha1Q91Y21 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha1Q91Y21 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha1Q91Y21 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha1Q91Y21 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha1Q91Y21 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdha1Q91Y21 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Pcdha1Q91Y21 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms