Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb6Q91XZ4 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb6Q91XZ4 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb6Q91XZ4 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb6Q91XZ4 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.15■□□□□ 0.66
Pcdhb6Q91XZ4 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb6Q91XZ4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb6Q91XZ4 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Pcdhb6Q91XZ4 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb6Q91XZ4 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb6Q91XZ4 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.15■□□□□ 0.66
Pcdhb6Q91XZ4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb6Q91XZ4 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.15■□□□□ 0.66
Pcdhb6Q91XZ4 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdhb6Q91XZ4 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdhb6Q91XZ4 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb6Q91XZ4 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
Pcdhb6Q91XZ4 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb6Q91XZ4 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb6Q91XZ4 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Pcdhb6Q91XZ4 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb6Q91XZ4 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb6Q91XZ4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb6Q91XZ4 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb6Q91XZ4 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb6Q91XZ4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb6Q91XZ4 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb6Q91XZ4 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb6Q91XZ4 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb6Q91XZ4 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb6Q91XZ4 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Pcdhb6Q91XZ4 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb6Q91XZ4 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb6Q91XZ4 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb6Q91XZ4 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.13■□□□□ 0.65
Pcdhb6Q91XZ4 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb6Q91XZ4 Gm18671-201ENSMUST00000214826 683 ntBASIC19.13■□□□□ 0.65
Pcdhb6Q91XZ4 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb6Q91XZ4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb6Q91XZ4 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Pcdhb6Q91XZ4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb6Q91XZ4 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb6Q91XZ4 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb6Q91XZ4 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb6Q91XZ4 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.12■□□□□ 0.65
Pcdhb6Q91XZ4 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb6Q91XZ4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb6Q91XZ4 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb6Q91XZ4 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Pcdhb6Q91XZ4 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb6Q91XZ4 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb6Q91XZ4 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Pcdhb6Q91XZ4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Pcdhb6Q91XZ4 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb6Q91XZ4 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Pcdhb6Q91XZ4 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb6Q91XZ4 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.11■□□□□ 0.65
Pcdhb6Q91XZ4 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb6Q91XZ4 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.11■□□□□ 0.65
Pcdhb6Q91XZ4 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb6Q91XZ4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb6Q91XZ4 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb6Q91XZ4 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb6Q91XZ4 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb6Q91XZ4 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb6Q91XZ4 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb6Q91XZ4 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb6Q91XZ4 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb6Q91XZ4 Gm10849-201ENSMUST00000100397 618 ntBASIC19.1■□□□□ 0.65
Pcdhb6Q91XZ4 Gm6420-201ENSMUST00000193885 723 ntBASIC19.1■□□□□ 0.65
Pcdhb6Q91XZ4 AV356131-201ENSMUST00000206201 750 ntBASIC19.1■□□□□ 0.65
Pcdhb6Q91XZ4 Gm7514-201ENSMUST00000209475 934 ntBASIC19.1■□□□□ 0.65
Pcdhb6Q91XZ4 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb6Q91XZ4 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb6Q91XZ4 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb6Q91XZ4 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb6Q91XZ4 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb6Q91XZ4 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb6Q91XZ4 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
Pcdhb6Q91XZ4 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb6Q91XZ4 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb6Q91XZ4 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb6Q91XZ4 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb6Q91XZ4 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
Pcdhb6Q91XZ4 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb6Q91XZ4 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb6Q91XZ4 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Pcdhb6Q91XZ4 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb6Q91XZ4 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Pcdhb6Q91XZ4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.09■□□□□ 0.65
Pcdhb6Q91XZ4 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.09■□□□□ 0.65
Pcdhb6Q91XZ4 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.08■□□□□ 0.65
Pcdhb6Q91XZ4 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb6Q91XZ4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb6Q91XZ4 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.08■□□□□ 0.64
Pcdhb6Q91XZ4 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.08■□□□□ 0.64
Pcdhb6Q91XZ4 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.08■□□□□ 0.64
Pcdhb6Q91XZ4 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb6Q91XZ4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb6Q91XZ4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms