Protein–RNA interactions for Protein: Q8WWY3

PRPF31, U4/U6 small nuclear ribonucleoprotein Prp31, humanhuman

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF31Q8WWY3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PRPF31Q8WWY3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.36■■□□□ 1.33
PRPF31Q8WWY3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
PRPF31Q8WWY3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PRPF31Q8WWY3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PRPF31Q8WWY3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PRPF31Q8WWY3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23.35■■□□□ 1.33
PRPF31Q8WWY3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.35■■□□□ 1.33
PRPF31Q8WWY3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.35■■□□□ 1.33
PRPF31Q8WWY3 AC133561.1-201ENST00000568600 2415 ntBASIC23.35■■□□□ 1.33
PRPF31Q8WWY3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
PRPF31Q8WWY3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PRPF31Q8WWY3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
PRPF31Q8WWY3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PRPF31Q8WWY3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PRPF31Q8WWY3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PRPF31Q8WWY3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PRPF31Q8WWY3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PRPF31Q8WWY3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
PRPF31Q8WWY3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.34■■□□□ 1.33
PRPF31Q8WWY3 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.34■■□□□ 1.33
PRPF31Q8WWY3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.34■■□□□ 1.33
PRPF31Q8WWY3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PRPF31Q8WWY3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PRPF31Q8WWY3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PRPF31Q8WWY3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
PRPF31Q8WWY3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
PRPF31Q8WWY3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
PRPF31Q8WWY3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PRPF31Q8WWY3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PRPF31Q8WWY3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PRPF31Q8WWY3 CROCCP5-201ENST00000436658 830 ntBASIC23.33■■□□□ 1.33
PRPF31Q8WWY3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PRPF31Q8WWY3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.33■■□□□ 1.33
PRPF31Q8WWY3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
PRPF31Q8WWY3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.33■■□□□ 1.33
PRPF31Q8WWY3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.33■■□□□ 1.33
PRPF31Q8WWY3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
PRPF31Q8WWY3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PRPF31Q8WWY3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PRPF31Q8WWY3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.32■■□□□ 1.32
PRPF31Q8WWY3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PRPF31Q8WWY3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.32■■□□□ 1.32
PRPF31Q8WWY3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PRPF31Q8WWY3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
PRPF31Q8WWY3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.32■■□□□ 1.32
PRPF31Q8WWY3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.32■■□□□ 1.32
PRPF31Q8WWY3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PRPF31Q8WWY3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PRPF31Q8WWY3 SLC7A5P1-201ENST00000568957 537 ntBASIC23.32■■□□□ 1.32
PRPF31Q8WWY3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.32■■□□□ 1.32
PRPF31Q8WWY3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.32■■□□□ 1.32
PRPF31Q8WWY3 AC008175.2-201ENST00000612840 297 ntBASIC23.32■■□□□ 1.32
PRPF31Q8WWY3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
PRPF31Q8WWY3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
PRPF31Q8WWY3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PRPF31Q8WWY3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.31■■□□□ 1.32
PRPF31Q8WWY3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.31■■□□□ 1.32
PRPF31Q8WWY3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC23.31■■□□□ 1.32
PRPF31Q8WWY3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PRPF31Q8WWY3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.31■■□□□ 1.32
PRPF31Q8WWY3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
PRPF31Q8WWY3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
PRPF31Q8WWY3 AC010536.3-201ENST00000620306 533 ntBASIC23.31■■□□□ 1.32
PRPF31Q8WWY3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PRPF31Q8WWY3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.31■■□□□ 1.32
PRPF31Q8WWY3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PRPF31Q8WWY3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PRPF31Q8WWY3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
PRPF31Q8WWY3 ECEL1P1-201ENST00000373592 1742 ntBASIC23.3■■□□□ 1.32
PRPF31Q8WWY3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PRPF31Q8WWY3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PRPF31Q8WWY3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.3■■□□□ 1.32
PRPF31Q8WWY3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.3■■□□□ 1.32
PRPF31Q8WWY3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC23.3■■□□□ 1.32
PRPF31Q8WWY3 POU5F1P4-201ENST00000413175 1085 ntBASIC23.3■■□□□ 1.32
PRPF31Q8WWY3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PRPF31Q8WWY3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.3■■□□□ 1.32
PRPF31Q8WWY3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.3■■□□□ 1.32
PRPF31Q8WWY3 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.3■■□□□ 1.32
PRPF31Q8WWY3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PRPF31Q8WWY3 AC061975.6-201ENST00000579045 1553 ntBASIC23.3■■□□□ 1.32
PRPF31Q8WWY3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PRPF31Q8WWY3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PRPF31Q8WWY3 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PRPF31Q8WWY3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PRPF31Q8WWY3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PRPF31Q8WWY3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PRPF31Q8WWY3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PRPF31Q8WWY3 ID1-201ENST00000376105 1233 ntBASIC23.29■■□□□ 1.32
PRPF31Q8WWY3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PRPF31Q8WWY3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
PRPF31Q8WWY3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.29■■□□□ 1.32
PRPF31Q8WWY3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.29■■□□□ 1.32
PRPF31Q8WWY3 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.29■■□□□ 1.32
PRPF31Q8WWY3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.29■■□□□ 1.32
PRPF31Q8WWY3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.29■■□□□ 1.32
PRPF31Q8WWY3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.29■■□□□ 1.32
PRPF31Q8WWY3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.29■■□□□ 1.32
PRPF31Q8WWY3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms