Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.87■□□□□ 0.77
Lmcd1Q8VEE1 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Lmcd1Q8VEE1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lmcd1Q8VEE1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Lmcd1Q8VEE1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Lmcd1Q8VEE1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Lmcd1Q8VEE1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lmcd1Q8VEE1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lmcd1Q8VEE1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.86■□□□□ 0.77
Lmcd1Q8VEE1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lmcd1Q8VEE1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lmcd1Q8VEE1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lmcd1Q8VEE1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lmcd1Q8VEE1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lmcd1Q8VEE1 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lmcd1Q8VEE1 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lmcd1Q8VEE1 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.86■□□□□ 0.77
Lmcd1Q8VEE1 Ank2-226ENSMUST00000189368 339 ntBASIC19.86■□□□□ 0.77
Lmcd1Q8VEE1 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.86■□□□□ 0.77
Lmcd1Q8VEE1 Gm18032-201ENSMUST00000222541 538 ntBASIC19.86■□□□□ 0.77
Lmcd1Q8VEE1 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lmcd1Q8VEE1 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lmcd1Q8VEE1 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Lmcd1Q8VEE1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lmcd1Q8VEE1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lmcd1Q8VEE1 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.86■□□□□ 0.77
Lmcd1Q8VEE1 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lmcd1Q8VEE1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lmcd1Q8VEE1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lmcd1Q8VEE1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lmcd1Q8VEE1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lmcd1Q8VEE1 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lmcd1Q8VEE1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lmcd1Q8VEE1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lmcd1Q8VEE1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.85■□□□□ 0.77
Lmcd1Q8VEE1 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lmcd1Q8VEE1 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lmcd1Q8VEE1 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
Lmcd1Q8VEE1 Gm18025-201ENSMUST00000221733 862 ntBASIC19.85■□□□□ 0.77
Lmcd1Q8VEE1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lmcd1Q8VEE1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lmcd1Q8VEE1 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.85■□□□□ 0.77
Lmcd1Q8VEE1 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lmcd1Q8VEE1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.85■□□□□ 0.77
Lmcd1Q8VEE1 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lmcd1Q8VEE1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Lmcd1Q8VEE1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lmcd1Q8VEE1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.84■□□□□ 0.77
Lmcd1Q8VEE1 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lmcd1Q8VEE1 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Lmcd1Q8VEE1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lmcd1Q8VEE1 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lmcd1Q8VEE1 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.84■□□□□ 0.77
Lmcd1Q8VEE1 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lmcd1Q8VEE1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lmcd1Q8VEE1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Lmcd1Q8VEE1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lmcd1Q8VEE1 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Lmcd1Q8VEE1 Gm14859-201ENSMUST00000117752 357 ntBASIC19.83■□□□□ 0.77
Lmcd1Q8VEE1 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.83■□□□□ 0.77
Lmcd1Q8VEE1 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lmcd1Q8VEE1 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.83■□□□□ 0.76
Lmcd1Q8VEE1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lmcd1Q8VEE1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Lmcd1Q8VEE1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lmcd1Q8VEE1 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lmcd1Q8VEE1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lmcd1Q8VEE1 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lmcd1Q8VEE1 Gm12382-201ENSMUST00000122005 922 ntBASIC19.82■□□□□ 0.76
Lmcd1Q8VEE1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lmcd1Q8VEE1 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lmcd1Q8VEE1 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lmcd1Q8VEE1 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Lmcd1Q8VEE1 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.82■□□□□ 0.76
Lmcd1Q8VEE1 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lmcd1Q8VEE1 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lmcd1Q8VEE1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lmcd1Q8VEE1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lmcd1Q8VEE1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.82■□□□□ 0.76
Lmcd1Q8VEE1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lmcd1Q8VEE1 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lmcd1Q8VEE1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lmcd1Q8VEE1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lmcd1Q8VEE1 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lmcd1Q8VEE1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lmcd1Q8VEE1 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Lmcd1Q8VEE1 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lmcd1Q8VEE1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Lmcd1Q8VEE1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Lmcd1Q8VEE1 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.81■□□□□ 0.76
Lmcd1Q8VEE1 Mtag2-201ENSMUST00000058665 714 ntBASIC19.81■□□□□ 0.76
Lmcd1Q8VEE1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Lmcd1Q8VEE1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lmcd1Q8VEE1 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lmcd1Q8VEE1 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lmcd1Q8VEE1 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Lmcd1Q8VEE1 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Lmcd1Q8VEE1 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Lmcd1Q8VEE1 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Lmcd1Q8VEE1 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms