Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubqln1Q8R317 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ubqln1Q8R317 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubqln1Q8R317 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.59■□□□□ 0.41
Ubqln1Q8R317 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubqln1Q8R317 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubqln1Q8R317 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubqln1Q8R317 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubqln1Q8R317 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubqln1Q8R317 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ubqln1Q8R317 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubqln1Q8R317 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubqln1Q8R317 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubqln1Q8R317 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.41
Ubqln1Q8R317 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ubqln1Q8R317 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubqln1Q8R317 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubqln1Q8R317 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubqln1Q8R317 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Ubqln1Q8R317 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Ubqln1Q8R317 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubqln1Q8R317 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubqln1Q8R317 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Ubqln1Q8R317 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubqln1Q8R317 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ubqln1Q8R317 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ubqln1Q8R317 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ubqln1Q8R317 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ubqln1Q8R317 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.57■□□□□ 0.4
Ubqln1Q8R317 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
Ubqln1Q8R317 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ubqln1Q8R317 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.57■□□□□ 0.4
Ubqln1Q8R317 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
Ubqln1Q8R317 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubqln1Q8R317 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubqln1Q8R317 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubqln1Q8R317 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ubqln1Q8R317 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubqln1Q8R317 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubqln1Q8R317 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ubqln1Q8R317 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubqln1Q8R317 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubqln1Q8R317 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubqln1Q8R317 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ubqln1Q8R317 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
Ubqln1Q8R317 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ubqln1Q8R317 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubqln1Q8R317 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubqln1Q8R317 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ubqln1Q8R317 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubqln1Q8R317 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubqln1Q8R317 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubqln1Q8R317 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubqln1Q8R317 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ubqln1Q8R317 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.55■□□□□ 0.4
Ubqln1Q8R317 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.55■□□□□ 0.4
Ubqln1Q8R317 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubqln1Q8R317 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubqln1Q8R317 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.55■□□□□ 0.4
Ubqln1Q8R317 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.55■□□□□ 0.4
Ubqln1Q8R317 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ubqln1Q8R317 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ubqln1Q8R317 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ubqln1Q8R317 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ubqln1Q8R317 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubqln1Q8R317 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.55■□□□□ 0.4
Ubqln1Q8R317 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubqln1Q8R317 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubqln1Q8R317 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubqln1Q8R317 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ubqln1Q8R317 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubqln1Q8R317 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ubqln1Q8R317 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubqln1Q8R317 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubqln1Q8R317 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubqln1Q8R317 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Ubqln1Q8R317 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubqln1Q8R317 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.54■□□□□ 0.4
Ubqln1Q8R317 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubqln1Q8R317 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubqln1Q8R317 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.54■□□□□ 0.4
Ubqln1Q8R317 Gm29257-201ENSMUST00000186115 639 ntBASIC17.54■□□□□ 0.4
Ubqln1Q8R317 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubqln1Q8R317 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubqln1Q8R317 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.54■□□□□ 0.4
Ubqln1Q8R317 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubqln1Q8R317 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubqln1Q8R317 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ubqln1Q8R317 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ubqln1Q8R317 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ubqln1Q8R317 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ubqln1Q8R317 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ubqln1Q8R317 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ubqln1Q8R317 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ubqln1Q8R317 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ubqln1Q8R317 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ubqln1Q8R317 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.53■□□□□ 0.4
Ubqln1Q8R317 AV356131-201ENSMUST00000206201 750 ntBASIC17.53■□□□□ 0.4
Ubqln1Q8R317 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.53■□□□□ 0.4
Ubqln1Q8R317 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms