Protein–RNA interactions for Protein: Q8R0K2

Trim31, E3 ubiquitin-protein ligase TRIM31, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim31Q8R0K2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim31Q8R0K2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim31Q8R0K2 Gm38205-201ENSMUST00000192243 258 ntBASIC18.12■□□□□ 0.49
Trim31Q8R0K2 Gm7291-201ENSMUST00000199147 382 ntBASIC18.12■□□□□ 0.49
Trim31Q8R0K2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim31Q8R0K2 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.12■□□□□ 0.49
Trim31Q8R0K2 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim31Q8R0K2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim31Q8R0K2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim31Q8R0K2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim31Q8R0K2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim31Q8R0K2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim31Q8R0K2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim31Q8R0K2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.12■□□□□ 0.49
Trim31Q8R0K2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim31Q8R0K2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim31Q8R0K2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim31Q8R0K2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim31Q8R0K2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Trim31Q8R0K2 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.11■□□□□ 0.49
Trim31Q8R0K2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim31Q8R0K2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trim31Q8R0K2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim31Q8R0K2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.11■□□□□ 0.49
Trim31Q8R0K2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.11■□□□□ 0.49
Trim31Q8R0K2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim31Q8R0K2 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim31Q8R0K2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Trim31Q8R0K2 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.11■□□□□ 0.49
Trim31Q8R0K2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim31Q8R0K2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim31Q8R0K2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim31Q8R0K2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim31Q8R0K2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim31Q8R0K2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim31Q8R0K2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim31Q8R0K2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim31Q8R0K2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim31Q8R0K2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim31Q8R0K2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
Trim31Q8R0K2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim31Q8R0K2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim31Q8R0K2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.1■□□□□ 0.49
Trim31Q8R0K2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim31Q8R0K2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim31Q8R0K2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.1■□□□□ 0.49
Trim31Q8R0K2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Trim31Q8R0K2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim31Q8R0K2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim31Q8R0K2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.09■□□□□ 0.49
Trim31Q8R0K2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.09■□□□□ 0.49
Trim31Q8R0K2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim31Q8R0K2 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim31Q8R0K2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trim31Q8R0K2 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
Trim31Q8R0K2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim31Q8R0K2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim31Q8R0K2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Trim31Q8R0K2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim31Q8R0K2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim31Q8R0K2 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim31Q8R0K2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Trim31Q8R0K2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Trim31Q8R0K2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim31Q8R0K2 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim31Q8R0K2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim31Q8R0K2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trim31Q8R0K2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Trim31Q8R0K2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim31Q8R0K2 Gm7860-201ENSMUST00000121190 879 ntBASIC18.08■□□□□ 0.48
Trim31Q8R0K2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim31Q8R0K2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim31Q8R0K2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim31Q8R0K2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim31Q8R0K2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim31Q8R0K2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim31Q8R0K2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim31Q8R0K2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim31Q8R0K2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Trim31Q8R0K2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trim31Q8R0K2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim31Q8R0K2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.07■□□□□ 0.48
Trim31Q8R0K2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trim31Q8R0K2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim31Q8R0K2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim31Q8R0K2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim31Q8R0K2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim31Q8R0K2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trim31Q8R0K2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Trim31Q8R0K2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trim31Q8R0K2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim31Q8R0K2 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.07■□□□□ 0.48
Trim31Q8R0K2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trim31Q8R0K2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.07■□□□□ 0.48
Trim31Q8R0K2 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.07■□□□□ 0.48
Trim31Q8R0K2 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim31Q8R0K2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim31Q8R0K2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim31Q8R0K2 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.07■□□□□ 0.48
Trim31Q8R0K2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms