Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.43■□□□□ 0.86
Sox30Q8CGW4 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.43■□□□□ 0.86
Sox30Q8CGW4 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.43■□□□□ 0.86
Sox30Q8CGW4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sox30Q8CGW4 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.43■□□□□ 0.86
Sox30Q8CGW4 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sox30Q8CGW4 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sox30Q8CGW4 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sox30Q8CGW4 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sox30Q8CGW4 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Sox30Q8CGW4 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.43■□□□□ 0.86
Sox30Q8CGW4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sox30Q8CGW4 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.42■□□□□ 0.86
Sox30Q8CGW4 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sox30Q8CGW4 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sox30Q8CGW4 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sox30Q8CGW4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.42■□□□□ 0.86
Sox30Q8CGW4 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
Sox30Q8CGW4 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sox30Q8CGW4 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.42■□□□□ 0.86
Sox30Q8CGW4 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sox30Q8CGW4 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sox30Q8CGW4 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sox30Q8CGW4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sox30Q8CGW4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sox30Q8CGW4 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sox30Q8CGW4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Sox30Q8CGW4 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.41■□□□□ 0.86
Sox30Q8CGW4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Sox30Q8CGW4 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.41■□□□□ 0.86
Sox30Q8CGW4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.41■□□□□ 0.86
Sox30Q8CGW4 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sox30Q8CGW4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.41■□□□□ 0.86
Sox30Q8CGW4 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sox30Q8CGW4 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sox30Q8CGW4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
Sox30Q8CGW4 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Sox30Q8CGW4 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.4■□□□□ 0.86
Sox30Q8CGW4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sox30Q8CGW4 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sox30Q8CGW4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sox30Q8CGW4 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sox30Q8CGW4 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Sox30Q8CGW4 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sox30Q8CGW4 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Sox30Q8CGW4 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.39■□□□□ 0.85
Sox30Q8CGW4 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.39■□□□□ 0.85
Sox30Q8CGW4 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sox30Q8CGW4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sox30Q8CGW4 Gm38205-201ENSMUST00000192243 258 ntBASIC20.39■□□□□ 0.85
Sox30Q8CGW4 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sox30Q8CGW4 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sox30Q8CGW4 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sox30Q8CGW4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Sox30Q8CGW4 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sox30Q8CGW4 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Sox30Q8CGW4 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.38■□□□□ 0.85
Sox30Q8CGW4 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sox30Q8CGW4 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sox30Q8CGW4 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sox30Q8CGW4 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sox30Q8CGW4 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Sox30Q8CGW4 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.38■□□□□ 0.85
Sox30Q8CGW4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.38■□□□□ 0.85
Sox30Q8CGW4 Gm8493-201ENSMUST00000196881 489 ntBASIC20.38■□□□□ 0.85
Sox30Q8CGW4 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sox30Q8CGW4 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Sox30Q8CGW4 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sox30Q8CGW4 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sox30Q8CGW4 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Sox30Q8CGW4 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Sox30Q8CGW4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Sox30Q8CGW4 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sox30Q8CGW4 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sox30Q8CGW4 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.37■□□□□ 0.85
Sox30Q8CGW4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Sox30Q8CGW4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sox30Q8CGW4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sox30Q8CGW4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sox30Q8CGW4 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sox30Q8CGW4 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sox30Q8CGW4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sox30Q8CGW4 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sox30Q8CGW4 Gm13241-201ENSMUST00000094493 780 ntBASIC20.37■□□□□ 0.85
Sox30Q8CGW4 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sox30Q8CGW4 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
Sox30Q8CGW4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sox30Q8CGW4 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sox30Q8CGW4 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sox30Q8CGW4 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Sox30Q8CGW4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sox30Q8CGW4 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sox30Q8CGW4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sox30Q8CGW4 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sox30Q8CGW4 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sox30Q8CGW4 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sox30Q8CGW4 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sox30Q8CGW4 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
Sox30Q8CGW4 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sox30Q8CGW4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms