Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Shisa4Q8CA71 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Shisa4Q8CA71 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.8■■□□□ 1.08
Shisa4Q8CA71 Gm12441-201ENSMUST00000121806 588 ntBASIC21.79■■□□□ 1.08
Shisa4Q8CA71 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Shisa4Q8CA71 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.79■■□□□ 1.08
Shisa4Q8CA71 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC21.79■■□□□ 1.08
Shisa4Q8CA71 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Shisa4Q8CA71 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Shisa4Q8CA71 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Shisa4Q8CA71 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Shisa4Q8CA71 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Shisa4Q8CA71 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Shisa4Q8CA71 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Shisa4Q8CA71 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Shisa4Q8CA71 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Shisa4Q8CA71 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Shisa4Q8CA71 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Shisa4Q8CA71 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Shisa4Q8CA71 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Shisa4Q8CA71 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.78■■□□□ 1.08
Shisa4Q8CA71 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Shisa4Q8CA71 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.78■■□□□ 1.08
Shisa4Q8CA71 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Shisa4Q8CA71 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Shisa4Q8CA71 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Shisa4Q8CA71 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Shisa4Q8CA71 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Shisa4Q8CA71 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Shisa4Q8CA71 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Shisa4Q8CA71 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
Shisa4Q8CA71 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Shisa4Q8CA71 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Shisa4Q8CA71 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Shisa4Q8CA71 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Shisa4Q8CA71 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
Shisa4Q8CA71 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Shisa4Q8CA71 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Shisa4Q8CA71 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Shisa4Q8CA71 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Shisa4Q8CA71 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.76■■□□□ 1.07
Shisa4Q8CA71 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21.76■■□□□ 1.07
Shisa4Q8CA71 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Shisa4Q8CA71 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Shisa4Q8CA71 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Shisa4Q8CA71 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Shisa4Q8CA71 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Shisa4Q8CA71 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Shisa4Q8CA71 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Shisa4Q8CA71 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Shisa4Q8CA71 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Shisa4Q8CA71 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.75■■□□□ 1.07
Shisa4Q8CA71 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Shisa4Q8CA71 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Shisa4Q8CA71 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Shisa4Q8CA71 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Shisa4Q8CA71 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Shisa4Q8CA71 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Shisa4Q8CA71 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Shisa4Q8CA71 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Shisa4Q8CA71 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Shisa4Q8CA71 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Shisa4Q8CA71 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Shisa4Q8CA71 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Shisa4Q8CA71 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Shisa4Q8CA71 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Shisa4Q8CA71 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Shisa4Q8CA71 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.73■■□□□ 1.07
Shisa4Q8CA71 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Shisa4Q8CA71 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Shisa4Q8CA71 Gm22240-201ENSMUST00000175225 82 ntBASIC21.73■■□□□ 1.07
Shisa4Q8CA71 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.73■■□□□ 1.07
Shisa4Q8CA71 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.73■■□□□ 1.07
Shisa4Q8CA71 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Shisa4Q8CA71 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Shisa4Q8CA71 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Shisa4Q8CA71 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Shisa4Q8CA71 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Shisa4Q8CA71 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.73■■□□□ 1.07
Shisa4Q8CA71 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Shisa4Q8CA71 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.72■■□□□ 1.07
Shisa4Q8CA71 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shisa4Q8CA71 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shisa4Q8CA71 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shisa4Q8CA71 Gm4968-201ENSMUST00000071458 858 ntBASIC21.72■■□□□ 1.07
Shisa4Q8CA71 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shisa4Q8CA71 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shisa4Q8CA71 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shisa4Q8CA71 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Shisa4Q8CA71 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Shisa4Q8CA71 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Shisa4Q8CA71 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Shisa4Q8CA71 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.71■■□□□ 1.07
Shisa4Q8CA71 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Shisa4Q8CA71 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Shisa4Q8CA71 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Shisa4Q8CA71 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Shisa4Q8CA71 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Shisa4Q8CA71 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Shisa4Q8CA71 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms