Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smndc1Q8BGT7 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smndc1Q8BGT7 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Smndc1Q8BGT7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smndc1Q8BGT7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smndc1Q8BGT7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smndc1Q8BGT7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Smndc1Q8BGT7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smndc1Q8BGT7 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smndc1Q8BGT7 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smndc1Q8BGT7 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.97■□□□□ 0.47
Smndc1Q8BGT7 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Smndc1Q8BGT7 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.97■□□□□ 0.47
Smndc1Q8BGT7 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smndc1Q8BGT7 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Smndc1Q8BGT7 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smndc1Q8BGT7 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smndc1Q8BGT7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.97■□□□□ 0.47
Smndc1Q8BGT7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smndc1Q8BGT7 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.97■□□□□ 0.47
Smndc1Q8BGT7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smndc1Q8BGT7 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Smndc1Q8BGT7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Smndc1Q8BGT7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smndc1Q8BGT7 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smndc1Q8BGT7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Smndc1Q8BGT7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smndc1Q8BGT7 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Smndc1Q8BGT7 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.96■□□□□ 0.47
Smndc1Q8BGT7 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smndc1Q8BGT7 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smndc1Q8BGT7 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.96■□□□□ 0.47
Smndc1Q8BGT7 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Smndc1Q8BGT7 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smndc1Q8BGT7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smndc1Q8BGT7 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smndc1Q8BGT7 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Smndc1Q8BGT7 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smndc1Q8BGT7 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smndc1Q8BGT7 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smndc1Q8BGT7 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
Smndc1Q8BGT7 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Smndc1Q8BGT7 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smndc1Q8BGT7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smndc1Q8BGT7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smndc1Q8BGT7 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smndc1Q8BGT7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.95■□□□□ 0.46
Smndc1Q8BGT7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smndc1Q8BGT7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smndc1Q8BGT7 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smndc1Q8BGT7 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smndc1Q8BGT7 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smndc1Q8BGT7 BC021767-201ENSMUST00000126387 1716 ntBASIC17.95■□□□□ 0.46
Smndc1Q8BGT7 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smndc1Q8BGT7 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.94■□□□□ 0.46
Smndc1Q8BGT7 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smndc1Q8BGT7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smndc1Q8BGT7 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smndc1Q8BGT7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smndc1Q8BGT7 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smndc1Q8BGT7 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Smndc1Q8BGT7 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smndc1Q8BGT7 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Smndc1Q8BGT7 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Smndc1Q8BGT7 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.94■□□□□ 0.46
Smndc1Q8BGT7 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smndc1Q8BGT7 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smndc1Q8BGT7 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smndc1Q8BGT7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smndc1Q8BGT7 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smndc1Q8BGT7 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smndc1Q8BGT7 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smndc1Q8BGT7 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smndc1Q8BGT7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Smndc1Q8BGT7 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smndc1Q8BGT7 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smndc1Q8BGT7 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Smndc1Q8BGT7 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smndc1Q8BGT7 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Smndc1Q8BGT7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smndc1Q8BGT7 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smndc1Q8BGT7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.93■□□□□ 0.46
Smndc1Q8BGT7 Gm43137-201ENSMUST00000198052 594 ntBASIC17.93■□□□□ 0.46
Smndc1Q8BGT7 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smndc1Q8BGT7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.93■□□□□ 0.46
Smndc1Q8BGT7 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smndc1Q8BGT7 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.93■□□□□ 0.46
Smndc1Q8BGT7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smndc1Q8BGT7 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smndc1Q8BGT7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smndc1Q8BGT7 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smndc1Q8BGT7 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Smndc1Q8BGT7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smndc1Q8BGT7 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.92■□□□□ 0.46
Smndc1Q8BGT7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.92■□□□□ 0.46
Smndc1Q8BGT7 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.92■□□□□ 0.46
Smndc1Q8BGT7 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smndc1Q8BGT7 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smndc1Q8BGT7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smndc1Q8BGT7 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms