Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.43■■□□□ 1.02
Prpf40bQ80W14 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Prpf40bQ80W14 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.43■■□□□ 1.02
Prpf40bQ80W14 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.43■■□□□ 1.02
Prpf40bQ80W14 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Prpf40bQ80W14 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Prpf40bQ80W14 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Prpf40bQ80W14 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.43■■□□□ 1.02
Prpf40bQ80W14 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Prpf40bQ80W14 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Prpf40bQ80W14 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Prpf40bQ80W14 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Prpf40bQ80W14 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Prpf40bQ80W14 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Prpf40bQ80W14 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Prpf40bQ80W14 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Prpf40bQ80W14 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Prpf40bQ80W14 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Prpf40bQ80W14 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Prpf40bQ80W14 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Prpf40bQ80W14 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Prpf40bQ80W14 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Prpf40bQ80W14 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Prpf40bQ80W14 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Prpf40bQ80W14 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC21.41■■□□□ 1.02
Prpf40bQ80W14 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Prpf40bQ80W14 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Prpf40bQ80W14 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Prpf40bQ80W14 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Prpf40bQ80W14 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Prpf40bQ80W14 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Prpf40bQ80W14 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Prpf40bQ80W14 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Prpf40bQ80W14 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Prpf40bQ80W14 Gm11643-201ENSMUST00000119578 864 ntBASIC21.4■■□□□ 1.02
Prpf40bQ80W14 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
Prpf40bQ80W14 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Prpf40bQ80W14 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Prpf40bQ80W14 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Prpf40bQ80W14 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Prpf40bQ80W14 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.02
Prpf40bQ80W14 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.39■■□□□ 1.01
Prpf40bQ80W14 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Prpf40bQ80W14 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC21.39■■□□□ 1.01
Prpf40bQ80W14 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Prpf40bQ80W14 AC154649.1-201ENSMUST00000227392 384 ntBASIC21.39■■□□□ 1.01
Prpf40bQ80W14 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Prpf40bQ80W14 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Prpf40bQ80W14 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Prpf40bQ80W14 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Prpf40bQ80W14 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
Prpf40bQ80W14 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Prpf40bQ80W14 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Prpf40bQ80W14 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Prpf40bQ80W14 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Prpf40bQ80W14 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Prpf40bQ80W14 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Prpf40bQ80W14 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.38■■□□□ 1.01
Prpf40bQ80W14 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Prpf40bQ80W14 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Prpf40bQ80W14 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Prpf40bQ80W14 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Prpf40bQ80W14 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.37■■□□□ 1.01
Prpf40bQ80W14 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Prpf40bQ80W14 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Prpf40bQ80W14 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Prpf40bQ80W14 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Prpf40bQ80W14 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Prpf40bQ80W14 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Prpf40bQ80W14 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Prpf40bQ80W14 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Prpf40bQ80W14 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Prpf40bQ80W14 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Prpf40bQ80W14 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
Prpf40bQ80W14 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Prpf40bQ80W14 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Prpf40bQ80W14 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.36■■□□□ 1.01
Prpf40bQ80W14 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Prpf40bQ80W14 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Prpf40bQ80W14 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
Prpf40bQ80W14 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Prpf40bQ80W14 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Prpf40bQ80W14 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Prpf40bQ80W14 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Prpf40bQ80W14 Gm2559-201ENSMUST00000201323 363 ntBASIC21.35■■□□□ 1.01
Prpf40bQ80W14 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.35■■□□□ 1.01
Prpf40bQ80W14 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.35■■□□□ 1.01
Prpf40bQ80W14 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Prpf40bQ80W14 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Prpf40bQ80W14 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Prpf40bQ80W14 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Prpf40bQ80W14 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Prpf40bQ80W14 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Prpf40bQ80W14 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Prpf40bQ80W14 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC21.34■■□□□ 1.01
Prpf40bQ80W14 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Prpf40bQ80W14 Gm37055-201ENSMUST00000191866 133 ntBASIC21.34■■□□□ 1.01
Prpf40bQ80W14 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Prpf40bQ80W14 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Prpf40bQ80W14 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms