Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim45Q6PFY8 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim45Q6PFY8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim45Q6PFY8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim45Q6PFY8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim45Q6PFY8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trim45Q6PFY8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim45Q6PFY8 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.57■□□□□ 0.4
Trim45Q6PFY8 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim45Q6PFY8 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim45Q6PFY8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim45Q6PFY8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Trim45Q6PFY8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Trim45Q6PFY8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim45Q6PFY8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim45Q6PFY8 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim45Q6PFY8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trim45Q6PFY8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim45Q6PFY8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trim45Q6PFY8 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim45Q6PFY8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trim45Q6PFY8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim45Q6PFY8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim45Q6PFY8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trim45Q6PFY8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim45Q6PFY8 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim45Q6PFY8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim45Q6PFY8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trim45Q6PFY8 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim45Q6PFY8 Rarb-207ENSMUST00000225921 2756 ntBASIC17.56■□□□□ 0.4
Trim45Q6PFY8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim45Q6PFY8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Trim45Q6PFY8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim45Q6PFY8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim45Q6PFY8 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim45Q6PFY8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim45Q6PFY8 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim45Q6PFY8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim45Q6PFY8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim45Q6PFY8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim45Q6PFY8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim45Q6PFY8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Trim45Q6PFY8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trim45Q6PFY8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim45Q6PFY8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trim45Q6PFY8 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim45Q6PFY8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim45Q6PFY8 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.55■□□□□ 0.4
Trim45Q6PFY8 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim45Q6PFY8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim45Q6PFY8 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim45Q6PFY8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.55■□□□□ 0.4
Trim45Q6PFY8 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Trim45Q6PFY8 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim45Q6PFY8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trim45Q6PFY8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim45Q6PFY8 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.55■□□□□ 0.4
Trim45Q6PFY8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim45Q6PFY8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim45Q6PFY8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim45Q6PFY8 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trim45Q6PFY8 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.54■□□□□ 0.4
Trim45Q6PFY8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trim45Q6PFY8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trim45Q6PFY8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim45Q6PFY8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim45Q6PFY8 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim45Q6PFY8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim45Q6PFY8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim45Q6PFY8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim45Q6PFY8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim45Q6PFY8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim45Q6PFY8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim45Q6PFY8 Gm12933-201ENSMUST00000120203 872 ntBASIC17.54■□□□□ 0.4
Trim45Q6PFY8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.54■□□□□ 0.4
Trim45Q6PFY8 Gm7514-201ENSMUST00000209475 934 ntBASIC17.54■□□□□ 0.4
Trim45Q6PFY8 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.54■□□□□ 0.4
Trim45Q6PFY8 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim45Q6PFY8 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim45Q6PFY8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim45Q6PFY8 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim45Q6PFY8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim45Q6PFY8 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trim45Q6PFY8 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim45Q6PFY8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim45Q6PFY8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim45Q6PFY8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim45Q6PFY8 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim45Q6PFY8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.53■□□□□ 0.4
Trim45Q6PFY8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.53■□□□□ 0.4
Trim45Q6PFY8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.53■□□□□ 0.4
Trim45Q6PFY8 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.53■□□□□ 0.4
Trim45Q6PFY8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim45Q6PFY8 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.53■□□□□ 0.4
Trim45Q6PFY8 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim45Q6PFY8 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim45Q6PFY8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim45Q6PFY8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim45Q6PFY8 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim45Q6PFY8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms