Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.86■□□□□ 0.93
Hdac4Q6NZM9 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hdac4Q6NZM9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hdac4Q6NZM9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hdac4Q6NZM9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hdac4Q6NZM9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hdac4Q6NZM9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Hdac4Q6NZM9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Hdac4Q6NZM9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hdac4Q6NZM9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hdac4Q6NZM9 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.85■□□□□ 0.93
Hdac4Q6NZM9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hdac4Q6NZM9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hdac4Q6NZM9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hdac4Q6NZM9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hdac4Q6NZM9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Hdac4Q6NZM9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hdac4Q6NZM9 Gm5874-201ENSMUST00000096101 508 ntBASIC20.84■□□□□ 0.93
Hdac4Q6NZM9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Hdac4Q6NZM9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hdac4Q6NZM9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Hdac4Q6NZM9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hdac4Q6NZM9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hdac4Q6NZM9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Hdac4Q6NZM9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hdac4Q6NZM9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hdac4Q6NZM9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.83■□□□□ 0.93
Hdac4Q6NZM9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hdac4Q6NZM9 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hdac4Q6NZM9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.83■□□□□ 0.92
Hdac4Q6NZM9 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Hdac4Q6NZM9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hdac4Q6NZM9 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hdac4Q6NZM9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hdac4Q6NZM9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
Hdac4Q6NZM9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hdac4Q6NZM9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Hdac4Q6NZM9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Hdac4Q6NZM9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hdac4Q6NZM9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hdac4Q6NZM9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hdac4Q6NZM9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.82■□□□□ 0.92
Hdac4Q6NZM9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Hdac4Q6NZM9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Hdac4Q6NZM9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Hdac4Q6NZM9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Hdac4Q6NZM9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hdac4Q6NZM9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hdac4Q6NZM9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.82■□□□□ 0.92
Hdac4Q6NZM9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Hdac4Q6NZM9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hdac4Q6NZM9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hdac4Q6NZM9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hdac4Q6NZM9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Hdac4Q6NZM9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hdac4Q6NZM9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hdac4Q6NZM9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hdac4Q6NZM9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Hdac4Q6NZM9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hdac4Q6NZM9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hdac4Q6NZM9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hdac4Q6NZM9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hdac4Q6NZM9 Gm42642-201ENSMUST00000200683 355 ntBASIC20.8■□□□□ 0.92
Hdac4Q6NZM9 Gm18671-201ENSMUST00000214826 683 ntBASIC20.8■□□□□ 0.92
Hdac4Q6NZM9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.8■□□□□ 0.92
Hdac4Q6NZM9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hdac4Q6NZM9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hdac4Q6NZM9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hdac4Q6NZM9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Hdac4Q6NZM9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Hdac4Q6NZM9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.79■□□□□ 0.92
Hdac4Q6NZM9 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.79■□□□□ 0.92
Hdac4Q6NZM9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hdac4Q6NZM9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hdac4Q6NZM9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Hdac4Q6NZM9 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hdac4Q6NZM9 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.78■□□□□ 0.92
Hdac4Q6NZM9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hdac4Q6NZM9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hdac4Q6NZM9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hdac4Q6NZM9 Gm18284-201ENSMUST00000172604 624 ntBASIC20.78■□□□□ 0.92
Hdac4Q6NZM9 Gm6420-201ENSMUST00000193885 723 ntBASIC20.78■□□□□ 0.92
Hdac4Q6NZM9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hdac4Q6NZM9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hdac4Q6NZM9 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.77■□□□□ 0.92
Hdac4Q6NZM9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hdac4Q6NZM9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
Hdac4Q6NZM9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hdac4Q6NZM9 Nespas-201ENSMUST00000143738 1083 ntBASIC20.77■□□□□ 0.92
Hdac4Q6NZM9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
Hdac4Q6NZM9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hdac4Q6NZM9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hdac4Q6NZM9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hdac4Q6NZM9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hdac4Q6NZM9 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Hdac4Q6NZM9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Hdac4Q6NZM9 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Hdac4Q6NZM9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Hdac4Q6NZM9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Hdac4Q6NZM9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms