Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retreg2Q6NS82 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retreg2Q6NS82 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retreg2Q6NS82 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retreg2Q6NS82 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retreg2Q6NS82 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Retreg2Q6NS82 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retreg2Q6NS82 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
Retreg2Q6NS82 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retreg2Q6NS82 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Retreg2Q6NS82 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Retreg2Q6NS82 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.96■□□□□ 0.79
Retreg2Q6NS82 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
Retreg2Q6NS82 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Retreg2Q6NS82 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Retreg2Q6NS82 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Retreg2Q6NS82 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Retreg2Q6NS82 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retreg2Q6NS82 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retreg2Q6NS82 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retreg2Q6NS82 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Retreg2Q6NS82 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retreg2Q6NS82 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retreg2Q6NS82 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retreg2Q6NS82 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retreg2Q6NS82 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retreg2Q6NS82 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retreg2Q6NS82 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retreg2Q6NS82 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retreg2Q6NS82 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retreg2Q6NS82 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.94■□□□□ 0.78
Retreg2Q6NS82 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.94■□□□□ 0.78
Retreg2Q6NS82 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.94■□□□□ 0.78
Retreg2Q6NS82 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
Retreg2Q6NS82 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retreg2Q6NS82 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Retreg2Q6NS82 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retreg2Q6NS82 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.94■□□□□ 0.78
Retreg2Q6NS82 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retreg2Q6NS82 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retreg2Q6NS82 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retreg2Q6NS82 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retreg2Q6NS82 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.93■□□□□ 0.78
Retreg2Q6NS82 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Retreg2Q6NS82 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retreg2Q6NS82 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retreg2Q6NS82 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retreg2Q6NS82 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.93■□□□□ 0.78
Retreg2Q6NS82 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.93■□□□□ 0.78
Retreg2Q6NS82 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retreg2Q6NS82 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retreg2Q6NS82 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retreg2Q6NS82 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retreg2Q6NS82 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retreg2Q6NS82 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retreg2Q6NS82 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retreg2Q6NS82 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retreg2Q6NS82 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retreg2Q6NS82 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
Retreg2Q6NS82 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retreg2Q6NS82 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Retreg2Q6NS82 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.92■□□□□ 0.78
Retreg2Q6NS82 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Retreg2Q6NS82 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retreg2Q6NS82 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retreg2Q6NS82 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retreg2Q6NS82 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Retreg2Q6NS82 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retreg2Q6NS82 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retreg2Q6NS82 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retreg2Q6NS82 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retreg2Q6NS82 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.91■□□□□ 0.78
Retreg2Q6NS82 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retreg2Q6NS82 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retreg2Q6NS82 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Retreg2Q6NS82 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Retreg2Q6NS82 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retreg2Q6NS82 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.91■□□□□ 0.78
Retreg2Q6NS82 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.91■□□□□ 0.78
Retreg2Q6NS82 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retreg2Q6NS82 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retreg2Q6NS82 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retreg2Q6NS82 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retreg2Q6NS82 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retreg2Q6NS82 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.91■□□□□ 0.78
Retreg2Q6NS82 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.91■□□□□ 0.78
Retreg2Q6NS82 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retreg2Q6NS82 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Retreg2Q6NS82 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retreg2Q6NS82 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Retreg2Q6NS82 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retreg2Q6NS82 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Retreg2Q6NS82 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retreg2Q6NS82 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retreg2Q6NS82 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Retreg2Q6NS82 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retreg2Q6NS82 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retreg2Q6NS82 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retreg2Q6NS82 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retreg2Q6NS82 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms