Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Foxc1Q61572 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Foxc1Q61572 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Foxc1Q61572 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Foxc1Q61572 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Foxc1Q61572 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Foxc1Q61572 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Foxc1Q61572 Gm20100-201ENSMUST00000209418 2272 ntBASIC13.57□□□□□ -0.24
Foxc1Q61572 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Foxc1Q61572 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Foxc1Q61572 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Foxc1Q61572 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Foxc1Q61572 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Foxc1Q61572 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Foxc1Q61572 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
Foxc1Q61572 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Foxc1Q61572 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC13.57□□□□□ -0.24
Foxc1Q61572 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Foxc1Q61572 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Foxc1Q61572 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Foxc1Q61572 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Foxc1Q61572 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Foxc1Q61572 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Foxc1Q61572 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Foxc1Q61572 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Foxc1Q61572 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Foxc1Q61572 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Foxc1Q61572 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC13.56□□□□□ -0.24
Foxc1Q61572 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Foxc1Q61572 Shroom3-211ENSMUST00000225438 5742 ntBASIC13.56□□□□□ -0.24
Foxc1Q61572 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Foxc1Q61572 Gm7860-201ENSMUST00000121190 879 ntBASIC13.56□□□□□ -0.24
Foxc1Q61572 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Foxc1Q61572 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC13.56□□□□□ -0.24
Foxc1Q61572 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC13.56□□□□□ -0.24
Foxc1Q61572 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Foxc1Q61572 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Foxc1Q61572 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Foxc1Q61572 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Foxc1Q61572 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Foxc1Q61572 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Foxc1Q61572 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Foxc1Q61572 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Foxc1Q61572 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Foxc1Q61572 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Foxc1Q61572 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Foxc1Q61572 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Foxc1Q61572 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Foxc1Q61572 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Foxc1Q61572 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC13.55□□□□□ -0.24
Foxc1Q61572 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Foxc1Q61572 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Foxc1Q61572 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Foxc1Q61572 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC13.55□□□□□ -0.24
Foxc1Q61572 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Foxc1Q61572 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Foxc1Q61572 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC13.55□□□□□ -0.24
Foxc1Q61572 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Foxc1Q61572 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Foxc1Q61572 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Foxc1Q61572 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Foxc1Q61572 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC13.54□□□□□ -0.24
Foxc1Q61572 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Foxc1Q61572 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxc1Q61572 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Foxc1Q61572 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxc1Q61572 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Foxc1Q61572 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Foxc1Q61572 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxc1Q61572 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxc1Q61572 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxc1Q61572 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC13.54□□□□□ -0.24
Foxc1Q61572 Gm38205-201ENSMUST00000192243 258 ntBASIC13.54□□□□□ -0.24
Foxc1Q61572 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Foxc1Q61572 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.54□□□□□ -0.24
Foxc1Q61572 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxc1Q61572 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Foxc1Q61572 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxc1Q61572 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC13.54□□□□□ -0.24
Foxc1Q61572 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC13.54□□□□□ -0.24
Foxc1Q61572 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxc1Q61572 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxc1Q61572 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Foxc1Q61572 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxc1Q61572 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxc1Q61572 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Foxc1Q61572 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxc1Q61572 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Foxc1Q61572 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Foxc1Q61572 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Foxc1Q61572 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxc1Q61572 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxc1Q61572 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxc1Q61572 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Foxc1Q61572 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxc1Q61572 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC13.53□□□□□ -0.24
Foxc1Q61572 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Foxc1Q61572 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Foxc1Q61572 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Foxc1Q61572 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms