Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.84■□□□□ 0.61
Six4Q61321 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Six4Q61321 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six4Q61321 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six4Q61321 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Six4Q61321 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six4Q61321 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Six4Q61321 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Six4Q61321 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Six4Q61321 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Six4Q61321 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Six4Q61321 Gm6365-201ENSMUST00000054711 744 ntBASIC18.83■□□□□ 0.6
Six4Q61321 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Six4Q61321 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Six4Q61321 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Six4Q61321 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Six4Q61321 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Six4Q61321 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Six4Q61321 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Six4Q61321 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Six4Q61321 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Six4Q61321 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.82■□□□□ 0.6
Six4Q61321 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.82■□□□□ 0.6
Six4Q61321 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Six4Q61321 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.82■□□□□ 0.6
Six4Q61321 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.82■□□□□ 0.6
Six4Q61321 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.82■□□□□ 0.6
Six4Q61321 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Six4Q61321 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Six4Q61321 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Six4Q61321 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Six4Q61321 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Six4Q61321 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Six4Q61321 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Six4Q61321 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Six4Q61321 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Six4Q61321 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Six4Q61321 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.81■□□□□ 0.6
Six4Q61321 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Six4Q61321 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Six4Q61321 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.81■□□□□ 0.6
Six4Q61321 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Six4Q61321 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Six4Q61321 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Six4Q61321 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Six4Q61321 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Six4Q61321 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Six4Q61321 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Six4Q61321 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Six4Q61321 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Six4Q61321 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Six4Q61321 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Six4Q61321 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.8■□□□□ 0.6
Six4Q61321 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Six4Q61321 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.8■□□□□ 0.6
Six4Q61321 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Six4Q61321 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Six4Q61321 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Six4Q61321 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Six4Q61321 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Six4Q61321 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Six4Q61321 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Six4Q61321 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
Six4Q61321 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Six4Q61321 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Six4Q61321 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Six4Q61321 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Six4Q61321 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Six4Q61321 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.79■□□□□ 0.6
Six4Q61321 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Six4Q61321 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Six4Q61321 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Six4Q61321 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Six4Q61321 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Six4Q61321 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Six4Q61321 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Six4Q61321 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.78■□□□□ 0.6
Six4Q61321 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.78■□□□□ 0.6
Six4Q61321 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.78■□□□□ 0.6
Six4Q61321 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Six4Q61321 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Six4Q61321 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Six4Q61321 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Six4Q61321 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Six4Q61321 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Six4Q61321 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Six4Q61321 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Six4Q61321 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Six4Q61321 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Six4Q61321 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Six4Q61321 Gm13148-201ENSMUST00000118892 745 ntBASIC18.77■□□□□ 0.6
Six4Q61321 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Six4Q61321 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Six4Q61321 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Six4Q61321 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Six4Q61321 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Six4Q61321 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.77■□□□□ 0.59
Six4Q61321 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Six4Q61321 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.76■□□□□ 0.59
Six4Q61321 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms