Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav8d-1Q5R1H8 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Trav8d-1Q5R1H8 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trav8d-1Q5R1H8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav8d-1Q5R1H8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Trav8d-1Q5R1H8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav8d-1Q5R1H8 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav8d-1Q5R1H8 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav8d-1Q5R1H8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav8d-1Q5R1H8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav8d-1Q5R1H8 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.22■□□□□ 0.03
Trav8d-1Q5R1H8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav8d-1Q5R1H8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav8d-1Q5R1H8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav8d-1Q5R1H8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav8d-1Q5R1H8 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav8d-1Q5R1H8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav8d-1Q5R1H8 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav8d-1Q5R1H8 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav8d-1Q5R1H8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav8d-1Q5R1H8 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav8d-1Q5R1H8 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav8d-1Q5R1H8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC15.21■□□□□ 0.03
Trav8d-1Q5R1H8 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC15.21■□□□□ 0.03
Trav8d-1Q5R1H8 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC15.21■□□□□ 0.03
Trav8d-1Q5R1H8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav8d-1Q5R1H8 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Trav8d-1Q5R1H8 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav8d-1Q5R1H8 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.21■□□□□ 0.03
Trav8d-1Q5R1H8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav8d-1Q5R1H8 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav8d-1Q5R1H8 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav8d-1Q5R1H8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav8d-1Q5R1H8 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Trav8d-1Q5R1H8 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav8d-1Q5R1H8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav8d-1Q5R1H8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav8d-1Q5R1H8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav8d-1Q5R1H8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav8d-1Q5R1H8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.2■□□□□ 0.02
Trav8d-1Q5R1H8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav8d-1Q5R1H8 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav8d-1Q5R1H8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav8d-1Q5R1H8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav8d-1Q5R1H8 Gm5576-201ENSMUST00000075809 1236 ntBASIC15.2■□□□□ 0.02
Trav8d-1Q5R1H8 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav8d-1Q5R1H8 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav8d-1Q5R1H8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav8d-1Q5R1H8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav8d-1Q5R1H8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav8d-1Q5R1H8 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav8d-1Q5R1H8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav8d-1Q5R1H8 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav8d-1Q5R1H8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav8d-1Q5R1H8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Trav8d-1Q5R1H8 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav8d-1Q5R1H8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav8d-1Q5R1H8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav8d-1Q5R1H8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC15.19■□□□□ 0.02
Trav8d-1Q5R1H8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav8d-1Q5R1H8 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav8d-1Q5R1H8 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav8d-1Q5R1H8 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav8d-1Q5R1H8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav8d-1Q5R1H8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav8d-1Q5R1H8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav8d-1Q5R1H8 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav8d-1Q5R1H8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav8d-1Q5R1H8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav8d-1Q5R1H8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav8d-1Q5R1H8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav8d-1Q5R1H8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav8d-1Q5R1H8 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav8d-1Q5R1H8 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trav8d-1Q5R1H8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC15.18■□□□□ 0.02
Trav8d-1Q5R1H8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC15.18■□□□□ 0.02
Trav8d-1Q5R1H8 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC15.18■□□□□ 0.02
Trav8d-1Q5R1H8 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav8d-1Q5R1H8 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC15.18■□□□□ 0.02
Trav8d-1Q5R1H8 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav8d-1Q5R1H8 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trav8d-1Q5R1H8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav8d-1Q5R1H8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav8d-1Q5R1H8 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav8d-1Q5R1H8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trav8d-1Q5R1H8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav8d-1Q5R1H8 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav8d-1Q5R1H8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav8d-1Q5R1H8 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trav8d-1Q5R1H8 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.17■□□□□ 0.02
Trav8d-1Q5R1H8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trav8d-1Q5R1H8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav8d-1Q5R1H8 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav8d-1Q5R1H8 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.17■□□□□ 0.02
Trav8d-1Q5R1H8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.17■□□□□ 0.02
Trav8d-1Q5R1H8 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav8d-1Q5R1H8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav8d-1Q5R1H8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav8d-1Q5R1H8 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav8d-1Q5R1H8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms