Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tmem40Q4FJU9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tmem40Q4FJU9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tmem40Q4FJU9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Tmem40Q4FJU9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tmem40Q4FJU9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tmem40Q4FJU9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tmem40Q4FJU9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Tmem40Q4FJU9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tmem40Q4FJU9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tmem40Q4FJU9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Tmem40Q4FJU9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tmem40Q4FJU9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Tmem40Q4FJU9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tmem40Q4FJU9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tmem40Q4FJU9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Tmem40Q4FJU9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Tmem40Q4FJU9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.79■□□□□ 0.12
Tmem40Q4FJU9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tmem40Q4FJU9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tmem40Q4FJU9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Tmem40Q4FJU9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Tmem40Q4FJU9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tmem40Q4FJU9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tmem40Q4FJU9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tmem40Q4FJU9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tmem40Q4FJU9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.78■□□□□ 0.12
Tmem40Q4FJU9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.78■□□□□ 0.12
Tmem40Q4FJU9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Tmem40Q4FJU9 Gm26524-201ENSMUST00000192339 390 ntBASIC15.78■□□□□ 0.12
Tmem40Q4FJU9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.78■□□□□ 0.12
Tmem40Q4FJU9 Rab3c-203ENSMUST00000224180 967 ntBASIC15.78■□□□□ 0.12
Tmem40Q4FJU9 AC154532.1-201ENSMUST00000227860 965 ntBASIC15.78■□□□□ 0.12
Tmem40Q4FJU9 Iqck-206ENSMUST00000208658 2891 ntBASIC15.78■□□□□ 0.12
Tmem40Q4FJU9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Tmem40Q4FJU9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tmem40Q4FJU9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tmem40Q4FJU9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Tmem40Q4FJU9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tmem40Q4FJU9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Tmem40Q4FJU9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tmem40Q4FJU9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tmem40Q4FJU9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Tmem40Q4FJU9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Tmem40Q4FJU9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tmem40Q4FJU9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Tmem40Q4FJU9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tmem40Q4FJU9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.77■□□□□ 0.12
Tmem40Q4FJU9 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.77■□□□□ 0.11
Tmem40Q4FJU9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Tmem40Q4FJU9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.77■□□□□ 0.11
Tmem40Q4FJU9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Tmem40Q4FJU9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tmem40Q4FJU9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tmem40Q4FJU9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tmem40Q4FJU9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Tmem40Q4FJU9 Gm37444-201ENSMUST00000193605 439 ntBASIC15.76■□□□□ 0.11
Tmem40Q4FJU9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Tmem40Q4FJU9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tmem40Q4FJU9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tmem40Q4FJU9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tmem40Q4FJU9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tmem40Q4FJU9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tmem40Q4FJU9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Tmem40Q4FJU9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tmem40Q4FJU9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tmem40Q4FJU9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tmem40Q4FJU9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tmem40Q4FJU9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tmem40Q4FJU9 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.75■□□□□ 0.11
Tmem40Q4FJU9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tmem40Q4FJU9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Tmem40Q4FJU9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tmem40Q4FJU9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tmem40Q4FJU9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.75■□□□□ 0.11
Tmem40Q4FJU9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tmem40Q4FJU9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Tmem40Q4FJU9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Tmem40Q4FJU9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Tmem40Q4FJU9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tmem40Q4FJU9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tmem40Q4FJU9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Tmem40Q4FJU9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Tmem40Q4FJU9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Tmem40Q4FJU9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tmem40Q4FJU9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Tmem40Q4FJU9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.74■□□□□ 0.11
Tmem40Q4FJU9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tmem40Q4FJU9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Tmem40Q4FJU9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.74■□□□□ 0.11
Tmem40Q4FJU9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Tmem40Q4FJU9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.74■□□□□ 0.11
Tmem40Q4FJU9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tmem40Q4FJU9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tmem40Q4FJU9 Gm7860-201ENSMUST00000121190 879 ntBASIC15.74■□□□□ 0.11
Tmem40Q4FJU9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Tmem40Q4FJU9 Gm27275-201ENSMUST00000184318 272 ntBASIC15.74■□□□□ 0.11
Tmem40Q4FJU9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Tmem40Q4FJU9 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tmem40Q4FJU9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms