Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Naf1Q3UMQ8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.91■□□□□ 0.62
Naf1Q3UMQ8 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Naf1Q3UMQ8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.91■□□□□ 0.62
Naf1Q3UMQ8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Naf1Q3UMQ8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Naf1Q3UMQ8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Naf1Q3UMQ8 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Naf1Q3UMQ8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Naf1Q3UMQ8 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Naf1Q3UMQ8 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Naf1Q3UMQ8 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.9■□□□□ 0.62
Naf1Q3UMQ8 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Naf1Q3UMQ8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Naf1Q3UMQ8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Naf1Q3UMQ8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Naf1Q3UMQ8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Naf1Q3UMQ8 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Naf1Q3UMQ8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Naf1Q3UMQ8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Naf1Q3UMQ8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
Naf1Q3UMQ8 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Naf1Q3UMQ8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Naf1Q3UMQ8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Naf1Q3UMQ8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.89■□□□□ 0.61
Naf1Q3UMQ8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Naf1Q3UMQ8 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.89■□□□□ 0.61
Naf1Q3UMQ8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Naf1Q3UMQ8 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Naf1Q3UMQ8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Naf1Q3UMQ8 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.89■□□□□ 0.61
Naf1Q3UMQ8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Naf1Q3UMQ8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Naf1Q3UMQ8 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.88■□□□□ 0.61
Naf1Q3UMQ8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Naf1Q3UMQ8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.88■□□□□ 0.61
Naf1Q3UMQ8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Naf1Q3UMQ8 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.88■□□□□ 0.61
Naf1Q3UMQ8 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.88■□□□□ 0.61
Naf1Q3UMQ8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Naf1Q3UMQ8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Naf1Q3UMQ8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Naf1Q3UMQ8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Naf1Q3UMQ8 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Naf1Q3UMQ8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Naf1Q3UMQ8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Naf1Q3UMQ8 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.88■□□□□ 0.61
Naf1Q3UMQ8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Naf1Q3UMQ8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Naf1Q3UMQ8 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Naf1Q3UMQ8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Naf1Q3UMQ8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Naf1Q3UMQ8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Naf1Q3UMQ8 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.87■□□□□ 0.61
Naf1Q3UMQ8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Naf1Q3UMQ8 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Naf1Q3UMQ8 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Naf1Q3UMQ8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Naf1Q3UMQ8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Naf1Q3UMQ8 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Naf1Q3UMQ8 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Naf1Q3UMQ8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Naf1Q3UMQ8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Naf1Q3UMQ8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.86■□□□□ 0.61
Naf1Q3UMQ8 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.86■□□□□ 0.61
Naf1Q3UMQ8 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Naf1Q3UMQ8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Naf1Q3UMQ8 Gm27275-201ENSMUST00000184318 272 ntBASIC18.86■□□□□ 0.61
Naf1Q3UMQ8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.86■□□□□ 0.61
Naf1Q3UMQ8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Naf1Q3UMQ8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Naf1Q3UMQ8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Naf1Q3UMQ8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Naf1Q3UMQ8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Naf1Q3UMQ8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Naf1Q3UMQ8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Naf1Q3UMQ8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Naf1Q3UMQ8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Naf1Q3UMQ8 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Naf1Q3UMQ8 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Naf1Q3UMQ8 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Naf1Q3UMQ8 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Naf1Q3UMQ8 Trmt13-210ENSMUST00000198454 880 ntBASIC18.85■□□□□ 0.61
Naf1Q3UMQ8 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Naf1Q3UMQ8 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.85■□□□□ 0.61
Naf1Q3UMQ8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Naf1Q3UMQ8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Naf1Q3UMQ8 Gm12896-201ENSMUST00000118430 226 ntBASIC18.84■□□□□ 0.61
Naf1Q3UMQ8 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.84■□□□□ 0.61
Naf1Q3UMQ8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Naf1Q3UMQ8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Naf1Q3UMQ8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Naf1Q3UMQ8 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Naf1Q3UMQ8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.83■□□□□ 0.61
Naf1Q3UMQ8 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Naf1Q3UMQ8 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.83■□□□□ 0.6
Naf1Q3UMQ8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Naf1Q3UMQ8 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Naf1Q3UMQ8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Naf1Q3UMQ8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms