Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Shcbp1lQ3TTP0 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shcbp1lQ3TTP0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Shcbp1lQ3TTP0 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shcbp1lQ3TTP0 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.7■□□□□ 0.58
Shcbp1lQ3TTP0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Shcbp1lQ3TTP0 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shcbp1lQ3TTP0 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shcbp1lQ3TTP0 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shcbp1lQ3TTP0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Shcbp1lQ3TTP0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.7■□□□□ 0.58
Shcbp1lQ3TTP0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Shcbp1lQ3TTP0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Shcbp1lQ3TTP0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shcbp1lQ3TTP0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shcbp1lQ3TTP0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shcbp1lQ3TTP0 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Shcbp1lQ3TTP0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shcbp1lQ3TTP0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shcbp1lQ3TTP0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Shcbp1lQ3TTP0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.69■□□□□ 0.58
Shcbp1lQ3TTP0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Shcbp1lQ3TTP0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shcbp1lQ3TTP0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Shcbp1lQ3TTP0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.69■□□□□ 0.58
Shcbp1lQ3TTP0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Shcbp1lQ3TTP0 Gm26524-201ENSMUST00000192339 390 ntBASIC18.69■□□□□ 0.58
Shcbp1lQ3TTP0 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.69■□□□□ 0.58
Shcbp1lQ3TTP0 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.69■□□□□ 0.58
Shcbp1lQ3TTP0 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.69■□□□□ 0.58
Shcbp1lQ3TTP0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.69■□□□□ 0.58
Shcbp1lQ3TTP0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Shcbp1lQ3TTP0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Shcbp1lQ3TTP0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shcbp1lQ3TTP0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shcbp1lQ3TTP0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Shcbp1lQ3TTP0 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shcbp1lQ3TTP0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Shcbp1lQ3TTP0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shcbp1lQ3TTP0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.68■□□□□ 0.58
Shcbp1lQ3TTP0 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.68■□□□□ 0.58
Shcbp1lQ3TTP0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shcbp1lQ3TTP0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shcbp1lQ3TTP0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Shcbp1lQ3TTP0 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Shcbp1lQ3TTP0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shcbp1lQ3TTP0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shcbp1lQ3TTP0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shcbp1lQ3TTP0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Shcbp1lQ3TTP0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shcbp1lQ3TTP0 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.67■□□□□ 0.58
Shcbp1lQ3TTP0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Shcbp1lQ3TTP0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shcbp1lQ3TTP0 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.67■□□□□ 0.58
Shcbp1lQ3TTP0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.67■□□□□ 0.58
Shcbp1lQ3TTP0 Rab3c-203ENSMUST00000224180 967 ntBASIC18.67■□□□□ 0.58
Shcbp1lQ3TTP0 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shcbp1lQ3TTP0 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.67■□□□□ 0.58
Shcbp1lQ3TTP0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shcbp1lQ3TTP0 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.67■□□□□ 0.58
Shcbp1lQ3TTP0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shcbp1lQ3TTP0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Shcbp1lQ3TTP0 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.67■□□□□ 0.58
Shcbp1lQ3TTP0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shcbp1lQ3TTP0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shcbp1lQ3TTP0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.66■□□□□ 0.58
Shcbp1lQ3TTP0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shcbp1lQ3TTP0 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shcbp1lQ3TTP0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Shcbp1lQ3TTP0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.66■□□□□ 0.58
Shcbp1lQ3TTP0 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shcbp1lQ3TTP0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Shcbp1lQ3TTP0 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.66■□□□□ 0.58
Shcbp1lQ3TTP0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Shcbp1lQ3TTP0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shcbp1lQ3TTP0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shcbp1lQ3TTP0 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.66■□□□□ 0.58
Shcbp1lQ3TTP0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Shcbp1lQ3TTP0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shcbp1lQ3TTP0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shcbp1lQ3TTP0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shcbp1lQ3TTP0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shcbp1lQ3TTP0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shcbp1lQ3TTP0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shcbp1lQ3TTP0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shcbp1lQ3TTP0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shcbp1lQ3TTP0 Gm20760-201ENSMUST00000179197 648 ntBASIC18.65■□□□□ 0.58
Shcbp1lQ3TTP0 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shcbp1lQ3TTP0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shcbp1lQ3TTP0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shcbp1lQ3TTP0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.65■□□□□ 0.58
Shcbp1lQ3TTP0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shcbp1lQ3TTP0 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Shcbp1lQ3TTP0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Shcbp1lQ3TTP0 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shcbp1lQ3TTP0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shcbp1lQ3TTP0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Shcbp1lQ3TTP0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Shcbp1lQ3TTP0 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Shcbp1lQ3TTP0 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms