Protein–RNA interactions for Protein: Q0P523

Cib3, Calcium and integrin-binding family member 3, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cib3Q0P523 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cib3Q0P523 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cib3Q0P523 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cib3Q0P523 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cib3Q0P523 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cib3Q0P523 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cib3Q0P523 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cib3Q0P523 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Cib3Q0P523 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cib3Q0P523 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cib3Q0P523 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cib3Q0P523 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cib3Q0P523 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cib3Q0P523 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cib3Q0P523 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cib3Q0P523 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cib3Q0P523 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cib3Q0P523 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cib3Q0P523 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cib3Q0P523 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cib3Q0P523 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cib3Q0P523 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC14.12□□□□□ -0.15
Cib3Q0P523 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cib3Q0P523 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cib3Q0P523 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cib3Q0P523 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cib3Q0P523 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cib3Q0P523 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cib3Q0P523 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cib3Q0P523 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cib3Q0P523 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cib3Q0P523 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cib3Q0P523 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cib3Q0P523 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cib3Q0P523 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.11□□□□□ -0.15
Cib3Q0P523 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cib3Q0P523 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cib3Q0P523 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cib3Q0P523 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.11□□□□□ -0.15
Cib3Q0P523 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cib3Q0P523 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cib3Q0P523 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cib3Q0P523 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.11□□□□□ -0.15
Cib3Q0P523 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cib3Q0P523 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cib3Q0P523 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cib3Q0P523 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cib3Q0P523 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cib3Q0P523 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cib3Q0P523 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cib3Q0P523 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cib3Q0P523 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cib3Q0P523 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cib3Q0P523 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cib3Q0P523 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.1□□□□□ -0.15
Cib3Q0P523 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC14.1□□□□□ -0.15
Cib3Q0P523 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cib3Q0P523 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cib3Q0P523 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cib3Q0P523 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cib3Q0P523 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cib3Q0P523 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cib3Q0P523 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cib3Q0P523 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.1□□□□□ -0.15
Cib3Q0P523 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cib3Q0P523 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cib3Q0P523 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cib3Q0P523 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cib3Q0P523 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cib3Q0P523 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cib3Q0P523 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.09□□□□□ -0.15
Cib3Q0P523 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cib3Q0P523 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cib3Q0P523 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cib3Q0P523 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cib3Q0P523 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cib3Q0P523 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cib3Q0P523 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cib3Q0P523 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cib3Q0P523 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cib3Q0P523 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cib3Q0P523 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cib3Q0P523 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cib3Q0P523 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cib3Q0P523 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cib3Q0P523 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC14.09□□□□□ -0.15
Cib3Q0P523 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cib3Q0P523 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cib3Q0P523 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cib3Q0P523 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cib3Q0P523 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cib3Q0P523 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cib3Q0P523 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cib3Q0P523 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cib3Q0P523 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.08□□□□□ -0.15
Cib3Q0P523 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cib3Q0P523 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cib3Q0P523 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cib3Q0P523 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cib3Q0P523 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms