Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SgcdP82347 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SgcdP82347 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SgcdP82347 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SgcdP82347 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.17■□□□□ 0.34
SgcdP82347 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SgcdP82347 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SgcdP82347 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SgcdP82347 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SgcdP82347 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.17■□□□□ 0.34
SgcdP82347 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.17■□□□□ 0.34
SgcdP82347 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SgcdP82347 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.16■□□□□ 0.34
SgcdP82347 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SgcdP82347 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SgcdP82347 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SgcdP82347 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SgcdP82347 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SgcdP82347 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SgcdP82347 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
SgcdP82347 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SgcdP82347 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
SgcdP82347 Gm43530-201ENSMUST00000195920 274 ntBASIC17.16■□□□□ 0.34
SgcdP82347 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SgcdP82347 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SgcdP82347 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SgcdP82347 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SgcdP82347 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SgcdP82347 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SgcdP82347 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SgcdP82347 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SgcdP82347 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SgcdP82347 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SgcdP82347 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SgcdP82347 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SgcdP82347 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SgcdP82347 Fst-202ENSMUST00000223640 2612 ntBASIC17.15■□□□□ 0.34
SgcdP82347 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.15■□□□□ 0.34
SgcdP82347 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SgcdP82347 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SgcdP82347 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SgcdP82347 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SgcdP82347 Gm43137-201ENSMUST00000198052 594 ntBASIC17.15■□□□□ 0.34
SgcdP82347 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.15■□□□□ 0.34
SgcdP82347 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SgcdP82347 Gm6139-201ENSMUST00000079261 882 ntBASIC17.15■□□□□ 0.34
SgcdP82347 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SgcdP82347 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SgcdP82347 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.15■□□□□ 0.34
SgcdP82347 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.15■□□□□ 0.34
SgcdP82347 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SgcdP82347 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.15■□□□□ 0.34
SgcdP82347 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SgcdP82347 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SgcdP82347 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SgcdP82347 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SgcdP82347 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SgcdP82347 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
SgcdP82347 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SgcdP82347 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SgcdP82347 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SgcdP82347 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SgcdP82347 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
SgcdP82347 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.14■□□□□ 0.33
SgcdP82347 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SgcdP82347 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SgcdP82347 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.14■□□□□ 0.33
SgcdP82347 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SgcdP82347 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SgcdP82347 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SgcdP82347 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SgcdP82347 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SgcdP82347 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SgcdP82347 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SgcdP82347 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SgcdP82347 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SgcdP82347 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SgcdP82347 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.13■□□□□ 0.33
SgcdP82347 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SgcdP82347 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.13■□□□□ 0.33
SgcdP82347 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SgcdP82347 AA386476-201ENSMUST00000098781 1665 ntBASIC17.13■□□□□ 0.33
SgcdP82347 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SgcdP82347 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.13■□□□□ 0.33
SgcdP82347 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SgcdP82347 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SgcdP82347 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SgcdP82347 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SgcdP82347 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SgcdP82347 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SgcdP82347 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SgcdP82347 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SgcdP82347 Mir7075-201ENSMUST00000184187 82 ntBASIC17.12■□□□□ 0.33
SgcdP82347 Gm29257-201ENSMUST00000186115 639 ntBASIC17.12■□□□□ 0.33
SgcdP82347 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.12■□□□□ 0.33
SgcdP82347 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.12■□□□□ 0.33
SgcdP82347 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SgcdP82347 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SgcdP82347 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SgcdP82347 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms