Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
Crnkl1P63154 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Crnkl1P63154 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.39■□□□□ 0.53
Crnkl1P63154 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Crnkl1P63154 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Crnkl1P63154 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Crnkl1P63154 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Crnkl1P63154 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Crnkl1P63154 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.38■□□□□ 0.53
Crnkl1P63154 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Crnkl1P63154 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Crnkl1P63154 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.38■□□□□ 0.53
Crnkl1P63154 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Crnkl1P63154 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Crnkl1P63154 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Crnkl1P63154 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Crnkl1P63154 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Crnkl1P63154 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Crnkl1P63154 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Crnkl1P63154 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Crnkl1P63154 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Crnkl1P63154 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Crnkl1P63154 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Crnkl1P63154 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Crnkl1P63154 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Crnkl1P63154 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Crnkl1P63154 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Crnkl1P63154 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Crnkl1P63154 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Crnkl1P63154 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Crnkl1P63154 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Crnkl1P63154 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Crnkl1P63154 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Crnkl1P63154 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Crnkl1P63154 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Crnkl1P63154 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Crnkl1P63154 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Crnkl1P63154 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Crnkl1P63154 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Crnkl1P63154 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.36■□□□□ 0.53
Crnkl1P63154 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.36■□□□□ 0.53
Crnkl1P63154 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Crnkl1P63154 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Crnkl1P63154 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Crnkl1P63154 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Crnkl1P63154 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Crnkl1P63154 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Crnkl1P63154 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Crnkl1P63154 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Crnkl1P63154 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Crnkl1P63154 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Crnkl1P63154 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Crnkl1P63154 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Crnkl1P63154 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.35■□□□□ 0.53
Crnkl1P63154 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Crnkl1P63154 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Crnkl1P63154 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Crnkl1P63154 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Crnkl1P63154 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Crnkl1P63154 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Crnkl1P63154 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.34■□□□□ 0.53
Crnkl1P63154 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Crnkl1P63154 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Crnkl1P63154 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Crnkl1P63154 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Crnkl1P63154 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Crnkl1P63154 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Crnkl1P63154 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Crnkl1P63154 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Crnkl1P63154 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.34■□□□□ 0.53
Crnkl1P63154 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Crnkl1P63154 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Crnkl1P63154 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Crnkl1P63154 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Crnkl1P63154 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Crnkl1P63154 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Crnkl1P63154 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Crnkl1P63154 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Crnkl1P63154 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.33■□□□□ 0.53
Crnkl1P63154 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Crnkl1P63154 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Crnkl1P63154 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Crnkl1P63154 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Crnkl1P63154 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Crnkl1P63154 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Crnkl1P63154 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.33■□□□□ 0.52
Crnkl1P63154 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.33■□□□□ 0.52
Crnkl1P63154 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Crnkl1P63154 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Crnkl1P63154 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Crnkl1P63154 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Crnkl1P63154 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.32■□□□□ 0.52
Crnkl1P63154 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Crnkl1P63154 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.32■□□□□ 0.52
Crnkl1P63154 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Crnkl1P63154 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.32■□□□□ 0.52
Crnkl1P63154 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.32■□□□□ 0.52
Crnkl1P63154 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.32■□□□□ 0.52
Crnkl1P63154 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Crnkl1P63154 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms