Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atxn1P54254 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.46■□□□□ 0.54
Atxn1P54254 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atxn1P54254 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.45■□□□□ 0.54
Atxn1P54254 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.45■□□□□ 0.54
Atxn1P54254 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atxn1P54254 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Atxn1P54254 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Atxn1P54254 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.45■□□□□ 0.54
Atxn1P54254 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.45■□□□□ 0.54
Atxn1P54254 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atxn1P54254 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.45■□□□□ 0.54
Atxn1P54254 Gm18666-201ENSMUST00000190039 958 ntBASIC18.45■□□□□ 0.54
Atxn1P54254 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atxn1P54254 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atxn1P54254 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Atxn1P54254 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atxn1P54254 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atxn1P54254 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atxn1P54254 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Atxn1P54254 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atxn1P54254 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atxn1P54254 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atxn1P54254 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atxn1P54254 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.44■□□□□ 0.54
Atxn1P54254 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.44■□□□□ 0.54
Atxn1P54254 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.44■□□□□ 0.54
Atxn1P54254 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atxn1P54254 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atxn1P54254 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atxn1P54254 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atxn1P54254 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Atxn1P54254 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atxn1P54254 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atxn1P54254 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.43■□□□□ 0.54
Atxn1P54254 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Atxn1P54254 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atxn1P54254 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atxn1P54254 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.43■□□□□ 0.54
Atxn1P54254 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atxn1P54254 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Atxn1P54254 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atxn1P54254 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atxn1P54254 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.43■□□□□ 0.54
Atxn1P54254 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atxn1P54254 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atxn1P54254 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atxn1P54254 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atxn1P54254 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.42■□□□□ 0.54
Atxn1P54254 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Atxn1P54254 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.42■□□□□ 0.54
Atxn1P54254 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.42■□□□□ 0.54
Atxn1P54254 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Atxn1P54254 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atxn1P54254 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atxn1P54254 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
Atxn1P54254 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.42■□□□□ 0.54
Atxn1P54254 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atxn1P54254 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atxn1P54254 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.41■□□□□ 0.54
Atxn1P54254 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.41■□□□□ 0.54
Atxn1P54254 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.41■□□□□ 0.54
Atxn1P54254 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Atxn1P54254 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Atxn1P54254 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Atxn1P54254 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atxn1P54254 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atxn1P54254 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.4■□□□□ 0.54
Atxn1P54254 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atxn1P54254 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Atxn1P54254 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atxn1P54254 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Atxn1P54254 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.4■□□□□ 0.54
Atxn1P54254 Gm11249-201ENSMUST00000117071 859 ntBASIC18.4■□□□□ 0.54
Atxn1P54254 Gm6433-201ENSMUST00000118634 875 ntBASIC18.4■□□□□ 0.54
Atxn1P54254 Gm15378-201ENSMUST00000121894 207 ntBASIC18.4■□□□□ 0.54
Atxn1P54254 Gm43799-201ENSMUST00000201845 579 ntBASIC18.4■□□□□ 0.54
Atxn1P54254 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atxn1P54254 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.4■□□□□ 0.54
Atxn1P54254 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Atxn1P54254 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atxn1P54254 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atxn1P54254 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Atxn1P54254 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Atxn1P54254 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Atxn1P54254 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.39■□□□□ 0.54
Atxn1P54254 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
Atxn1P54254 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atxn1P54254 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atxn1P54254 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.39■□□□□ 0.53
Atxn1P54254 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.39■□□□□ 0.53
Atxn1P54254 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atxn1P54254 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Atxn1P54254 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atxn1P54254 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atxn1P54254 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atxn1P54254 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Atxn1P54254 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atxn1P54254 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atxn1P54254 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms