Protein–RNA interactions for Protein: P50516

Atp6v1a, V-type proton ATPase catalytic subunit A, mousemouse

Known RBP Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1aP50516 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Atp6v1aP50516 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Atp6v1aP50516 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Atp6v1aP50516 Flg-201ENSMUST00000050758 1488 ntBASIC22.42■■□□□ 1.18
Atp6v1aP50516 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Atp6v1aP50516 Alkbh1-212ENSMUST00000185301 408 ntBASIC22.42■■□□□ 1.18
Atp6v1aP50516 AC107452.1-201ENSMUST00000227963 481 ntBASIC22.42■■□□□ 1.18
Atp6v1aP50516 Gm45640-201ENSMUST00000210665 1896 ntBASIC22.42■■□□□ 1.18
Atp6v1aP50516 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Atp6v1aP50516 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Atp6v1aP50516 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Atp6v1aP50516 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Atp6v1aP50516 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Atp6v1aP50516 Gm5540-201ENSMUST00000131852 1848 ntBASIC22.41■■□□□ 1.18
Atp6v1aP50516 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Atp6v1aP50516 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Atp6v1aP50516 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Atp6v1aP50516 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC22.41■■□□□ 1.18
Atp6v1aP50516 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC22.41■■□□□ 1.18
Atp6v1aP50516 Mir5122-201ENSMUST00000175004 89 ntBASIC22.41■■□□□ 1.18
Atp6v1aP50516 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Atp6v1aP50516 Wnt10b-205ENSMUST00000226846 1204 ntBASIC22.41■■□□□ 1.18
Atp6v1aP50516 AC121577.1-201ENSMUST00000227302 707 ntBASIC22.41■■□□□ 1.18
Atp6v1aP50516 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Atp6v1aP50516 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Atp6v1aP50516 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Atp6v1aP50516 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Atp6v1aP50516 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Atp6v1aP50516 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Atp6v1aP50516 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Atp6v1aP50516 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Atp6v1aP50516 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Atp6v1aP50516 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Atp6v1aP50516 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Atp6v1aP50516 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Atp6v1aP50516 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Atp6v1aP50516 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Atp6v1aP50516 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Atp6v1aP50516 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Atp6v1aP50516 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Atp6v1aP50516 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Atp6v1aP50516 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Atp6v1aP50516 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Atp6v1aP50516 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Atp6v1aP50516 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Atp6v1aP50516 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Atp6v1aP50516 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Atp6v1aP50516 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Atp6v1aP50516 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC22.39■■□□□ 1.17
Atp6v1aP50516 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Atp6v1aP50516 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Atp6v1aP50516 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Atp6v1aP50516 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Atp6v1aP50516 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Atp6v1aP50516 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Atp6v1aP50516 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC22.38■■□□□ 1.17
Atp6v1aP50516 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Atp6v1aP50516 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Atp6v1aP50516 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Atp6v1aP50516 Gm5417-201ENSMUST00000079706 384 ntBASIC22.38■■□□□ 1.17
Atp6v1aP50516 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Atp6v1aP50516 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Atp6v1aP50516 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Atp6v1aP50516 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Atp6v1aP50516 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC22.37■■□□□ 1.17
Atp6v1aP50516 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Atp6v1aP50516 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC22.37■■□□□ 1.17
Atp6v1aP50516 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC22.37■■□□□ 1.17
Atp6v1aP50516 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Atp6v1aP50516 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC22.37■■□□□ 1.17
Atp6v1aP50516 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Atp6v1aP50516 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Atp6v1aP50516 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Atp6v1aP50516 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Atp6v1aP50516 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Atp6v1aP50516 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Atp6v1aP50516 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Atp6v1aP50516 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC22.36■■□□□ 1.17
Atp6v1aP50516 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC22.36■■□□□ 1.17
Atp6v1aP50516 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Atp6v1aP50516 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Atp6v1aP50516 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Atp6v1aP50516 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Atp6v1aP50516 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Atp6v1aP50516 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Atp6v1aP50516 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Atp6v1aP50516 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Atp6v1aP50516 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Atp6v1aP50516 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Atp6v1aP50516 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Atp6v1aP50516 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Atp6v1aP50516 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Atp6v1aP50516 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Atp6v1aP50516 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC22.34■■□□□ 1.17
Atp6v1aP50516 Gm37352-201ENSMUST00000193908 2181 ntBASIC22.34■■□□□ 1.17
Atp6v1aP50516 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Atp6v1aP50516 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Atp6v1aP50516 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Atp6v1aP50516 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Atp6v1aP50516 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms