Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Cd74P04441 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cd74P04441 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Cd74P04441 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cd74P04441 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
Cd74P04441 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Cd74P04441 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cd74P04441 Gm13234-201ENSMUST00000120010 747 ntBASIC15.57■□□□□ 0.08
Cd74P04441 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Cd74P04441 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.57■□□□□ 0.08
Cd74P04441 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.57■□□□□ 0.08
Cd74P04441 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC15.57■□□□□ 0.08
Cd74P04441 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cd74P04441 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cd74P04441 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cd74P04441 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cd74P04441 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cd74P04441 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cd74P04441 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cd74P04441 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cd74P04441 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cd74P04441 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cd74P04441 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Cd74P04441 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cd74P04441 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cd74P04441 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.56■□□□□ 0.08
Cd74P04441 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.56■□□□□ 0.08
Cd74P04441 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cd74P04441 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cd74P04441 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cd74P04441 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cd74P04441 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cd74P04441 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cd74P04441 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cd74P04441 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cd74P04441 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cd74P04441 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Cd74P04441 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cd74P04441 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cd74P04441 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Cd74P04441 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cd74P04441 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cd74P04441 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cd74P04441 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cd74P04441 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cd74P04441 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cd74P04441 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cd74P04441 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cd74P04441 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cd74P04441 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.55■□□□□ 0.08
Cd74P04441 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cd74P04441 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cd74P04441 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cd74P04441 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cd74P04441 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cd74P04441 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cd74P04441 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cd74P04441 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Cd74P04441 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Cd74P04441 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cd74P04441 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cd74P04441 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cd74P04441 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cd74P04441 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cd74P04441 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cd74P04441 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cd74P04441 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cd74P04441 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cd74P04441 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cd74P04441 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.54■□□□□ 0.08
Cd74P04441 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cd74P04441 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cd74P04441 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.54■□□□□ 0.08
Cd74P04441 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cd74P04441 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cd74P04441 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cd74P04441 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cd74P04441 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cd74P04441 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cd74P04441 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cd74P04441 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Cd74P04441 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Cd74P04441 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Cd74P04441 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.53■□□□□ 0.08
Cd74P04441 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cd74P04441 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC15.53■□□□□ 0.08
Cd74P04441 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.53■□□□□ 0.08
Cd74P04441 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cd74P04441 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cd74P04441 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cd74P04441 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cd74P04441 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Cd74P04441 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Cd74P04441 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cd74P04441 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cd74P04441 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cd74P04441 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Cd74P04441 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cd74P04441 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cd74P04441 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms