Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TcraP01849 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TcraP01849 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
TcraP01849 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TcraP01849 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TcraP01849 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TcraP01849 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TcraP01849 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TcraP01849 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TcraP01849 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TcraP01849 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TcraP01849 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
TcraP01849 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TcraP01849 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TcraP01849 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC13.59□□□□□ -0.23
TcraP01849 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC13.59□□□□□ -0.23
TcraP01849 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TcraP01849 Gm40881-201ENSMUST00000223397 166 ntBASIC13.59□□□□□ -0.23
TcraP01849 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TcraP01849 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
TcraP01849 Gm43702-201ENSMUST00000198772 2546 ntBASIC13.59□□□□□ -0.23
TcraP01849 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TcraP01849 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TcraP01849 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TcraP01849 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TcraP01849 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TcraP01849 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TcraP01849 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TcraP01849 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TcraP01849 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TcraP01849 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TcraP01849 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
TcraP01849 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC13.58□□□□□ -0.24
TcraP01849 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC13.58□□□□□ -0.24
TcraP01849 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC13.58□□□□□ -0.24
TcraP01849 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TcraP01849 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TcraP01849 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TcraP01849 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TcraP01849 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TcraP01849 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TcraP01849 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
TcraP01849 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TcraP01849 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TcraP01849 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TcraP01849 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TcraP01849 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TcraP01849 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TcraP01849 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.57□□□□□ -0.24
TcraP01849 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TcraP01849 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TcraP01849 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TcraP01849 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TcraP01849 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
TcraP01849 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TcraP01849 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TcraP01849 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TcraP01849 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TcraP01849 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TcraP01849 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC13.57□□□□□ -0.24
TcraP01849 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TcraP01849 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TcraP01849 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
TcraP01849 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TcraP01849 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TcraP01849 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TcraP01849 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TcraP01849 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TcraP01849 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TcraP01849 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TcraP01849 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.56□□□□□ -0.24
TcraP01849 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TcraP01849 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TcraP01849 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TcraP01849 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TcraP01849 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TcraP01849 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC13.55□□□□□ -0.24
TcraP01849 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TcraP01849 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TcraP01849 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TcraP01849 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC13.55□□□□□ -0.24
TcraP01849 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TcraP01849 Gm42501-201ENSMUST00000200220 1026 ntBASIC13.55□□□□□ -0.24
TcraP01849 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TcraP01849 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TcraP01849 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TcraP01849 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC13.55□□□□□ -0.24
TcraP01849 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TcraP01849 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TcraP01849 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TcraP01849 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TcraP01849 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TcraP01849 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TcraP01849 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TcraP01849 Gm42922-201ENSMUST00000195887 2078 ntBASIC13.54□□□□□ -0.24
TcraP01849 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
TcraP01849 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC13.54□□□□□ -0.24
TcraP01849 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC13.54□□□□□ -0.24
TcraP01849 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC13.54□□□□□ -0.24
TcraP01849 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms