Protein–RNA interactions for Protein: O94788

ALDH1A2, Retinal dehydrogenase 2, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A2O94788 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ALDH1A2O94788 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ALDH1A2O94788 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ALDH1A2O94788 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ALDH1A2O94788 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
ALDH1A2O94788 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.96■■□□□ 1.11
ALDH1A2O94788 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
ALDH1A2O94788 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
ALDH1A2O94788 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ALDH1A2O94788 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.96■■□□□ 1.11
ALDH1A2O94788 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.96■■□□□ 1.11
ALDH1A2O94788 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
ALDH1A2O94788 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
ALDH1A2O94788 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ALDH1A2O94788 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
ALDH1A2O94788 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ALDH1A2O94788 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ALDH1A2O94788 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
ALDH1A2O94788 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ALDH1A2O94788 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.95■■□□□ 1.1
ALDH1A2O94788 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ALDH1A2O94788 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ALDH1A2O94788 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ALDH1A2O94788 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ALDH1A2O94788 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ALDH1A2O94788 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ALDH1A2O94788 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ALDH1A2O94788 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.95■■□□□ 1.1
ALDH1A2O94788 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ALDH1A2O94788 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.94■■□□□ 1.1
ALDH1A2O94788 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ALDH1A2O94788 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
ALDH1A2O94788 AC010542.4-201ENST00000563151 1910 ntBASIC21.94■■□□□ 1.1
ALDH1A2O94788 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.94■■□□□ 1.1
ALDH1A2O94788 CROCCP5-201ENST00000436658 830 ntBASIC21.94■■□□□ 1.1
ALDH1A2O94788 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.94■■□□□ 1.1
ALDH1A2O94788 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ALDH1A2O94788 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.94■■□□□ 1.1
ALDH1A2O94788 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ALDH1A2O94788 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
ALDH1A2O94788 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ALDH1A2O94788 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ALDH1A2O94788 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ALDH1A2O94788 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.94■■□□□ 1.1
ALDH1A2O94788 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ALDH1A2O94788 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.94■■□□□ 1.1
ALDH1A2O94788 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ALDH1A2O94788 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
ALDH1A2O94788 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.94■■□□□ 1.1
ALDH1A2O94788 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ALDH1A2O94788 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ALDH1A2O94788 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ALDH1A2O94788 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
ALDH1A2O94788 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ALDH1A2O94788 AL355802.2-201ENST00000402069 882 ntBASIC21.93■■□□□ 1.1
ALDH1A2O94788 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.93■■□□□ 1.1
ALDH1A2O94788 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.93■■□□□ 1.1
ALDH1A2O94788 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ALDH1A2O94788 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.93■■□□□ 1.1
ALDH1A2O94788 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
ALDH1A2O94788 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
ALDH1A2O94788 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.92■■□□□ 1.1
ALDH1A2O94788 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ALDH1A2O94788 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
ALDH1A2O94788 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ALDH1A2O94788 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ALDH1A2O94788 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ALDH1A2O94788 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ALDH1A2O94788 NCF1B-203ENST00000435988 1254 ntBASIC21.92■■□□□ 1.1
ALDH1A2O94788 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.92■■□□□ 1.1
ALDH1A2O94788 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.92■■□□□ 1.1
ALDH1A2O94788 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ALDH1A2O94788 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
ALDH1A2O94788 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.92■■□□□ 1.1
ALDH1A2O94788 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.91■■□□□ 1.1
ALDH1A2O94788 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.91■■□□□ 1.1
ALDH1A2O94788 AC009237.3-201ENST00000393279 1427 ntBASIC21.91■■□□□ 1.1
ALDH1A2O94788 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ALDH1A2O94788 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
ALDH1A2O94788 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ALDH1A2O94788 MIR663A-201ENST00000385250 93 ntBASIC21.91■■□□□ 1.1
ALDH1A2O94788 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
ALDH1A2O94788 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ALDH1A2O94788 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
ALDH1A2O94788 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.91■■□□□ 1.1
ALDH1A2O94788 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ALDH1A2O94788 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
ALDH1A2O94788 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ALDH1A2O94788 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.91■■□□□ 1.1
ALDH1A2O94788 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.91■■□□□ 1.1
ALDH1A2O94788 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ALDH1A2O94788 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.9■■□□□ 1.1
ALDH1A2O94788 GPX1P1-201ENST00000388829 606 ntBASIC21.9■■□□□ 1.1
ALDH1A2O94788 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ALDH1A2O94788 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
ALDH1A2O94788 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ALDH1A2O94788 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
ALDH1A2O94788 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
ALDH1A2O94788 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
ALDH1A2O94788 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms