Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Sh2d1aO88890 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Sh2d1aO88890 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh2d1aO88890 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Sh2d1aO88890 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh2d1aO88890 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh2d1aO88890 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh2d1aO88890 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sh2d1aO88890 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh2d1aO88890 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh2d1aO88890 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh2d1aO88890 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh2d1aO88890 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC13.13□□□□□ -0.31
Sh2d1aO88890 Gm43231-201ENSMUST00000202960 2258 ntBASIC13.13□□□□□ -0.31
Sh2d1aO88890 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh2d1aO88890 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh2d1aO88890 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Sh2d1aO88890 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Sh2d1aO88890 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Sh2d1aO88890 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh2d1aO88890 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh2d1aO88890 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh2d1aO88890 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Sh2d1aO88890 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh2d1aO88890 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sh2d1aO88890 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sh2d1aO88890 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh2d1aO88890 Cdc34b-202ENSMUST00000188741 1252 ntBASIC13.12□□□□□ -0.31
Sh2d1aO88890 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC13.12□□□□□ -0.31
Sh2d1aO88890 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh2d1aO88890 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Sh2d1aO88890 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh2d1aO88890 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sh2d1aO88890 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC13.12□□□□□ -0.31
Sh2d1aO88890 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh2d1aO88890 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh2d1aO88890 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh2d1aO88890 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh2d1aO88890 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh2d1aO88890 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh2d1aO88890 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Sh2d1aO88890 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh2d1aO88890 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh2d1aO88890 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Sh2d1aO88890 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sh2d1aO88890 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Sh2d1aO88890 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh2d1aO88890 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh2d1aO88890 Gm5540-201ENSMUST00000131852 1848 ntBASIC13.11□□□□□ -0.31
Sh2d1aO88890 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh2d1aO88890 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sh2d1aO88890 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.11□□□□□ -0.31
Sh2d1aO88890 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Sh2d1aO88890 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Sh2d1aO88890 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Sh2d1aO88890 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Sh2d1aO88890 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC13.11□□□□□ -0.31
Sh2d1aO88890 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh2d1aO88890 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh2d1aO88890 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh2d1aO88890 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh2d1aO88890 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh2d1aO88890 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh2d1aO88890 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh2d1aO88890 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh2d1aO88890 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sh2d1aO88890 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh2d1aO88890 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sh2d1aO88890 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Sh2d1aO88890 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh2d1aO88890 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sh2d1aO88890 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Sh2d1aO88890 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh2d1aO88890 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Sh2d1aO88890 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sh2d1aO88890 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh2d1aO88890 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh2d1aO88890 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC13.1□□□□□ -0.31
Sh2d1aO88890 Gm43060-201ENSMUST00000200621 289 ntBASIC13.1□□□□□ -0.31
Sh2d1aO88890 AC124603.1-201ENSMUST00000223843 308 ntBASIC13.1□□□□□ -0.31
Sh2d1aO88890 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Sh2d1aO88890 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh2d1aO88890 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh2d1aO88890 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sh2d1aO88890 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh2d1aO88890 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh2d1aO88890 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh2d1aO88890 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh2d1aO88890 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh2d1aO88890 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sh2d1aO88890 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC13.09□□□□□ -0.31
Sh2d1aO88890 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Sh2d1aO88890 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Sh2d1aO88890 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh2d1aO88890 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh2d1aO88890 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sh2d1aO88890 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Sh2d1aO88890 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sh2d1aO88890 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh2d1aO88890 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms