Protein–RNA interactions for Protein: O88689

Pcdha4, Protocadherin alpha-4, mousemouse

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha4O88689 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdha4O88689 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.82■□□□□ 0.92
Pcdha4O88689 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdha4O88689 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.82■□□□□ 0.92
Pcdha4O88689 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Pcdha4O88689 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdha4O88689 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.81■□□□□ 0.92
Pcdha4O88689 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Pcdha4O88689 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdha4O88689 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.81■□□□□ 0.92
Pcdha4O88689 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdha4O88689 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Pcdha4O88689 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdha4O88689 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.81■□□□□ 0.92
Pcdha4O88689 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.8■□□□□ 0.92
Pcdha4O88689 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Pcdha4O88689 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Pcdha4O88689 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdha4O88689 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdha4O88689 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.8■□□□□ 0.92
Pcdha4O88689 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdha4O88689 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdha4O88689 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdha4O88689 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdha4O88689 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdha4O88689 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.8■□□□□ 0.92
Pcdha4O88689 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdha4O88689 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdha4O88689 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.8■□□□□ 0.92
Pcdha4O88689 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Pcdha4O88689 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdha4O88689 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdha4O88689 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdha4O88689 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.79■□□□□ 0.92
Pcdha4O88689 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
Pcdha4O88689 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdha4O88689 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.79■□□□□ 0.92
Pcdha4O88689 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdha4O88689 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Pcdha4O88689 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Pcdha4O88689 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdha4O88689 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdha4O88689 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdha4O88689 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdha4O88689 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdha4O88689 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.78■□□□□ 0.92
Pcdha4O88689 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdha4O88689 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdha4O88689 Gm29257-201ENSMUST00000186115 639 ntBASIC20.78■□□□□ 0.92
Pcdha4O88689 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Pcdha4O88689 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Pcdha4O88689 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdha4O88689 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.78■□□□□ 0.92
Pcdha4O88689 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdha4O88689 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Pcdha4O88689 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdha4O88689 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Pcdha4O88689 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Pcdha4O88689 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdha4O88689 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdha4O88689 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdha4O88689 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Pcdha4O88689 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.77■□□□□ 0.92
Pcdha4O88689 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdha4O88689 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Pcdha4O88689 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Pcdha4O88689 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.76■□□□□ 0.91
Pcdha4O88689 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdha4O88689 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdha4O88689 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdha4O88689 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.76■□□□□ 0.91
Pcdha4O88689 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdha4O88689 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdha4O88689 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdha4O88689 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdha4O88689 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdha4O88689 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdha4O88689 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha4O88689 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha4O88689 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Pcdha4O88689 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha4O88689 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha4O88689 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha4O88689 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha4O88689 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha4O88689 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha4O88689 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha4O88689 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha4O88689 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha4O88689 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.75■□□□□ 0.91
Pcdha4O88689 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Pcdha4O88689 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.75■□□□□ 0.91
Pcdha4O88689 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha4O88689 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha4O88689 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha4O88689 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha4O88689 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.74■□□□□ 0.91
Pcdha4O88689 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.74■□□□□ 0.91
Pcdha4O88689 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.74■□□□□ 0.91
Pcdha4O88689 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms