Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf17O88472 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Tnfrsf17O88472 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.33■□□□□ 0.36
Tnfrsf17O88472 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf17O88472 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Tnfrsf17O88472 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf17O88472 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf17O88472 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf17O88472 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf17O88472 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.32■□□□□ 0.36
Tnfrsf17O88472 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.32■□□□□ 0.36
Tnfrsf17O88472 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Tnfrsf17O88472 Gm14859-201ENSMUST00000117752 357 ntBASIC17.32■□□□□ 0.36
Tnfrsf17O88472 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.32■□□□□ 0.36
Tnfrsf17O88472 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.32■□□□□ 0.36
Tnfrsf17O88472 Timm23-208ENSMUST00000226683 750 ntBASIC17.32■□□□□ 0.36
Tnfrsf17O88472 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.32■□□□□ 0.36
Tnfrsf17O88472 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Tnfrsf17O88472 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf17O88472 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf17O88472 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.32■□□□□ 0.36
Tnfrsf17O88472 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Tnfrsf17O88472 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf17O88472 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf17O88472 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Tnfrsf17O88472 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf17O88472 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf17O88472 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf17O88472 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf17O88472 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf17O88472 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf17O88472 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.31■□□□□ 0.36
Tnfrsf17O88472 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf17O88472 Gm18959-201ENSMUST00000208954 655 ntBASIC17.31■□□□□ 0.36
Tnfrsf17O88472 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Tnfrsf17O88472 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.31■□□□□ 0.36
Tnfrsf17O88472 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf17O88472 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf17O88472 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf17O88472 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Tnfrsf17O88472 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Tnfrsf17O88472 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Tnfrsf17O88472 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf17O88472 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf17O88472 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf17O88472 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf17O88472 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf17O88472 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf17O88472 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.3■□□□□ 0.36
Tnfrsf17O88472 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.3■□□□□ 0.36
Tnfrsf17O88472 Gm18032-201ENSMUST00000222541 538 ntBASIC17.3■□□□□ 0.36
Tnfrsf17O88472 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf17O88472 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf17O88472 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.3■□□□□ 0.36
Tnfrsf17O88472 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf17O88472 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf17O88472 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf17O88472 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf17O88472 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Tnfrsf17O88472 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.29■□□□□ 0.36
Tnfrsf17O88472 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf17O88472 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.29■□□□□ 0.36
Tnfrsf17O88472 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf17O88472 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Tnfrsf17O88472 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf17O88472 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf17O88472 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf17O88472 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.28■□□□□ 0.36
Tnfrsf17O88472 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.28■□□□□ 0.36
Tnfrsf17O88472 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Tnfrsf17O88472 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf17O88472 Mtag2-201ENSMUST00000058665 714 ntBASIC17.28■□□□□ 0.36
Tnfrsf17O88472 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf17O88472 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf17O88472 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.28■□□□□ 0.36
Tnfrsf17O88472 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.28■□□□□ 0.36
Tnfrsf17O88472 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf17O88472 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf17O88472 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf17O88472 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfrsf17O88472 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfrsf17O88472 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.27■□□□□ 0.36
Tnfrsf17O88472 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfrsf17O88472 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfrsf17O88472 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfrsf17O88472 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfrsf17O88472 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.27■□□□□ 0.36
Tnfrsf17O88472 Gm25925-201ENSMUST00000158314 306 ntBASIC17.27■□□□□ 0.36
Tnfrsf17O88472 Gm17971-201ENSMUST00000190239 806 ntBASIC17.27■□□□□ 0.36
Tnfrsf17O88472 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.27■□□□□ 0.36
Tnfrsf17O88472 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.27■□□□□ 0.36
Tnfrsf17O88472 Gm7461-201ENSMUST00000058918 827 ntBASIC17.27■□□□□ 0.36
Tnfrsf17O88472 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfrsf17O88472 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfrsf17O88472 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Tnfrsf17O88472 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf17O88472 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf17O88472 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf17O88472 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Tnfrsf17O88472 Gm12382-201ENSMUST00000122005 922 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms