Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pja1O55176 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pja1O55176 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pja1O55176 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pja1O55176 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pja1O55176 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pja1O55176 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pja1O55176 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pja1O55176 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pja1O55176 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Pja1O55176 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pja1O55176 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Pja1O55176 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Pja1O55176 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pja1O55176 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pja1O55176 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pja1O55176 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Pja1O55176 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pja1O55176 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pja1O55176 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Pja1O55176 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.65■□□□□ 0.74
Pja1O55176 Gm8493-201ENSMUST00000196881 489 ntBASIC19.65■□□□□ 0.74
Pja1O55176 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Pja1O55176 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pja1O55176 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.64■□□□□ 0.74
Pja1O55176 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pja1O55176 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
Pja1O55176 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pja1O55176 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.64■□□□□ 0.73
Pja1O55176 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pja1O55176 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.64■□□□□ 0.73
Pja1O55176 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pja1O55176 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.64■□□□□ 0.73
Pja1O55176 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pja1O55176 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Pja1O55176 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.64■□□□□ 0.73
Pja1O55176 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pja1O55176 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pja1O55176 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pja1O55176 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.63■□□□□ 0.73
Pja1O55176 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Pja1O55176 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pja1O55176 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Pja1O55176 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pja1O55176 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pja1O55176 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pja1O55176 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.63■□□□□ 0.73
Pja1O55176 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pja1O55176 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Pja1O55176 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pja1O55176 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pja1O55176 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pja1O55176 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pja1O55176 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Pja1O55176 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.62■□□□□ 0.73
Pja1O55176 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pja1O55176 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pja1O55176 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Pja1O55176 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pja1O55176 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Pja1O55176 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pja1O55176 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pja1O55176 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Pja1O55176 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pja1O55176 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pja1O55176 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pja1O55176 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pja1O55176 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.61■□□□□ 0.73
Pja1O55176 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pja1O55176 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pja1O55176 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pja1O55176 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Pja1O55176 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pja1O55176 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.61■□□□□ 0.73
Pja1O55176 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pja1O55176 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pja1O55176 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pja1O55176 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Pja1O55176 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pja1O55176 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pja1O55176 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pja1O55176 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pja1O55176 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Pja1O55176 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Pja1O55176 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.6■□□□□ 0.73
Pja1O55176 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pja1O55176 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pja1O55176 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Pja1O55176 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pja1O55176 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pja1O55176 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
Pja1O55176 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pja1O55176 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pja1O55176 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pja1O55176 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pja1O55176 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pja1O55176 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.59■□□□□ 0.73
Pja1O55176 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pja1O55176 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pja1O55176 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms