Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ercc2O08811 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ercc2O08811 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ercc2O08811 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ercc2O08811 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ercc2O08811 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ercc2O08811 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ercc2O08811 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ercc2O08811 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ercc2O08811 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ercc2O08811 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Ercc2O08811 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ercc2O08811 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ercc2O08811 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ercc2O08811 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Ercc2O08811 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ercc2O08811 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ercc2O08811 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ercc2O08811 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ercc2O08811 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.05■□□□□ 0.64
Ercc2O08811 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ercc2O08811 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ercc2O08811 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.05■□□□□ 0.64
Ercc2O08811 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ercc2O08811 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ercc2O08811 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ercc2O08811 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ercc2O08811 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ercc2O08811 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ercc2O08811 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ercc2O08811 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Ercc2O08811 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ercc2O08811 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.04■□□□□ 0.64
Ercc2O08811 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ercc2O08811 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ercc2O08811 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Ercc2O08811 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ercc2O08811 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ercc2O08811 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ercc2O08811 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.04■□□□□ 0.64
Ercc2O08811 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ercc2O08811 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ercc2O08811 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ercc2O08811 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ercc2O08811 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ercc2O08811 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.03■□□□□ 0.64
Ercc2O08811 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.03■□□□□ 0.64
Ercc2O08811 Gm27405-201ENSMUST00000184201 112 ntBASIC19.03■□□□□ 0.64
Ercc2O08811 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.03■□□□□ 0.64
Ercc2O08811 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ercc2O08811 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ercc2O08811 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ercc2O08811 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ercc2O08811 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ercc2O08811 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ercc2O08811 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ercc2O08811 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ercc2O08811 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ercc2O08811 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ercc2O08811 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Ercc2O08811 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Ercc2O08811 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Ercc2O08811 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.02■□□□□ 0.63
Ercc2O08811 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ercc2O08811 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ercc2O08811 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ercc2O08811 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ercc2O08811 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ercc2O08811 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ercc2O08811 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.01■□□□□ 0.63
Ercc2O08811 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ercc2O08811 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ercc2O08811 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.01■□□□□ 0.63
Ercc2O08811 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ercc2O08811 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ercc2O08811 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ercc2O08811 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ercc2O08811 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ercc2O08811 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ercc2O08811 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ercc2O08811 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ercc2O08811 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ercc2O08811 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ercc2O08811 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ercc2O08811 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ercc2O08811 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ercc2O08811 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ercc2O08811 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19■□□□□ 0.63
Ercc2O08811 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ercc2O08811 Gm7856-201ENSMUST00000117514 1493 ntBASIC19■□□□□ 0.63
Ercc2O08811 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Ercc2O08811 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ercc2O08811 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Ercc2O08811 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ercc2O08811 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Ercc2O08811 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ercc2O08811 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ercc2O08811 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Ercc2O08811 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ercc2O08811 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms