Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.1■□□□□ 0.65
Trim55G3X8Y1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim55G3X8Y1 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim55G3X8Y1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Trim55G3X8Y1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim55G3X8Y1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim55G3X8Y1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim55G3X8Y1 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Trim55G3X8Y1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.09■□□□□ 0.65
Trim55G3X8Y1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Trim55G3X8Y1 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Trim55G3X8Y1 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim55G3X8Y1 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim55G3X8Y1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim55G3X8Y1 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.09■□□□□ 0.65
Trim55G3X8Y1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim55G3X8Y1 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.09■□□□□ 0.65
Trim55G3X8Y1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim55G3X8Y1 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim55G3X8Y1 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim55G3X8Y1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim55G3X8Y1 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim55G3X8Y1 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Trim55G3X8Y1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim55G3X8Y1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim55G3X8Y1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim55G3X8Y1 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim55G3X8Y1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim55G3X8Y1 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Trim55G3X8Y1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim55G3X8Y1 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Trim55G3X8Y1 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.08■□□□□ 0.65
Trim55G3X8Y1 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.08■□□□□ 0.65
Trim55G3X8Y1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.08■□□□□ 0.65
Trim55G3X8Y1 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC19.08■□□□□ 0.64
Trim55G3X8Y1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim55G3X8Y1 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim55G3X8Y1 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim55G3X8Y1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.08■□□□□ 0.64
Trim55G3X8Y1 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trim55G3X8Y1 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trim55G3X8Y1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim55G3X8Y1 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
Trim55G3X8Y1 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim55G3X8Y1 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim55G3X8Y1 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Trim55G3X8Y1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim55G3X8Y1 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Trim55G3X8Y1 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim55G3X8Y1 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim55G3X8Y1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Trim55G3X8Y1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.07■□□□□ 0.64
Trim55G3X8Y1 Gm5921-201ENSMUST00000075898 882 ntBASIC19.07■□□□□ 0.64
Trim55G3X8Y1 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Trim55G3X8Y1 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim55G3X8Y1 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim55G3X8Y1 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.07■□□□□ 0.64
Trim55G3X8Y1 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim55G3X8Y1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.07■□□□□ 0.64
Trim55G3X8Y1 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim55G3X8Y1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim55G3X8Y1 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.07■□□□□ 0.64
Trim55G3X8Y1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim55G3X8Y1 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.06■□□□□ 0.64
Trim55G3X8Y1 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim55G3X8Y1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim55G3X8Y1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Trim55G3X8Y1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Trim55G3X8Y1 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim55G3X8Y1 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim55G3X8Y1 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim55G3X8Y1 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim55G3X8Y1 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim55G3X8Y1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim55G3X8Y1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim55G3X8Y1 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim55G3X8Y1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim55G3X8Y1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.05■□□□□ 0.64
Trim55G3X8Y1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Trim55G3X8Y1 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim55G3X8Y1 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim55G3X8Y1 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim55G3X8Y1 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trim55G3X8Y1 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim55G3X8Y1 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Trim55G3X8Y1 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim55G3X8Y1 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim55G3X8Y1 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC19.05■□□□□ 0.64
Trim55G3X8Y1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim55G3X8Y1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim55G3X8Y1 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim55G3X8Y1 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim55G3X8Y1 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim55G3X8Y1 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Trim55G3X8Y1 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim55G3X8Y1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.04■□□□□ 0.64
Trim55G3X8Y1 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim55G3X8Y1 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Trim55G3X8Y1 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.04■□□□□ 0.64
Trim55G3X8Y1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms