Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf4lE9Q2N0 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf4lE9Q2N0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf4lE9Q2N0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf4lE9Q2N0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf4lE9Q2N0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf4lE9Q2N0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf4lE9Q2N0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf4lE9Q2N0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4lE9Q2N0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4lE9Q2N0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4lE9Q2N0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4lE9Q2N0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4lE9Q2N0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4lE9Q2N0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4lE9Q2N0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4lE9Q2N0 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4lE9Q2N0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.78■□□□□ 0.12
Cpsf4lE9Q2N0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4lE9Q2N0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4lE9Q2N0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf4lE9Q2N0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cpsf4lE9Q2N0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cpsf4lE9Q2N0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cpsf4lE9Q2N0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cpsf4lE9Q2N0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cpsf4lE9Q2N0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cpsf4lE9Q2N0 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cpsf4lE9Q2N0 Gm7291-201ENSMUST00000199147 382 ntBASIC15.77■□□□□ 0.12
Cpsf4lE9Q2N0 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Cpsf4lE9Q2N0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Cpsf4lE9Q2N0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Cpsf4lE9Q2N0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Cpsf4lE9Q2N0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cpsf4lE9Q2N0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Cpsf4lE9Q2N0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf4lE9Q2N0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf4lE9Q2N0 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Cpsf4lE9Q2N0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf4lE9Q2N0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf4lE9Q2N0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf4lE9Q2N0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf4lE9Q2N0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf4lE9Q2N0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf4lE9Q2N0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpsf4lE9Q2N0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpsf4lE9Q2N0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpsf4lE9Q2N0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.75■□□□□ 0.11
Cpsf4lE9Q2N0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.75■□□□□ 0.11
Cpsf4lE9Q2N0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpsf4lE9Q2N0 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpsf4lE9Q2N0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cpsf4lE9Q2N0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cpsf4lE9Q2N0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpsf4lE9Q2N0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpsf4lE9Q2N0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpsf4lE9Q2N0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpsf4lE9Q2N0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpsf4lE9Q2N0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Cpsf4lE9Q2N0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpsf4lE9Q2N0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpsf4lE9Q2N0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpsf4lE9Q2N0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.75■□□□□ 0.11
Cpsf4lE9Q2N0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.75■□□□□ 0.11
Cpsf4lE9Q2N0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cpsf4lE9Q2N0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpsf4lE9Q2N0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpsf4lE9Q2N0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpsf4lE9Q2N0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpsf4lE9Q2N0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpsf4lE9Q2N0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.74■□□□□ 0.11
Cpsf4lE9Q2N0 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.74■□□□□ 0.11
Cpsf4lE9Q2N0 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC15.74■□□□□ 0.11
Cpsf4lE9Q2N0 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Cpsf4lE9Q2N0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.74■□□□□ 0.11
Cpsf4lE9Q2N0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpsf4lE9Q2N0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpsf4lE9Q2N0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Cpsf4lE9Q2N0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpsf4lE9Q2N0 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Cpsf4lE9Q2N0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cpsf4lE9Q2N0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpsf4lE9Q2N0 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpsf4lE9Q2N0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpsf4lE9Q2N0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpsf4lE9Q2N0 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cpsf4lE9Q2N0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.73■□□□□ 0.11
Cpsf4lE9Q2N0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.73■□□□□ 0.11
Cpsf4lE9Q2N0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.73■□□□□ 0.11
Cpsf4lE9Q2N0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Cpsf4lE9Q2N0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpsf4lE9Q2N0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpsf4lE9Q2N0 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpsf4lE9Q2N0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpsf4lE9Q2N0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cpsf4lE9Q2N0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Cpsf4lE9Q2N0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpsf4lE9Q2N0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpsf4lE9Q2N0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cpsf4lE9Q2N0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms