Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Col6a5A6H584 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a5A6H584 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a5A6H584 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Col6a5A6H584 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.14□□□□□ -0.15
Col6a5A6H584 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a5A6H584 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a5A6H584 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC14.14□□□□□ -0.15
Col6a5A6H584 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Col6a5A6H584 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a5A6H584 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a5A6H584 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a5A6H584 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a5A6H584 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Col6a5A6H584 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Col6a5A6H584 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a5A6H584 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Col6a5A6H584 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a5A6H584 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Col6a5A6H584 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a5A6H584 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a5A6H584 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Col6a5A6H584 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a5A6H584 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a5A6H584 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.13□□□□□ -0.15
Col6a5A6H584 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Col6a5A6H584 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a5A6H584 Gm8587-201ENSMUST00000076538 843 ntBASIC14.13□□□□□ -0.15
Col6a5A6H584 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a5A6H584 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a5A6H584 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a5A6H584 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a5A6H584 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a5A6H584 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.13□□□□□ -0.15
Col6a5A6H584 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a5A6H584 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a5A6H584 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Col6a5A6H584 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a5A6H584 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a5A6H584 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.12□□□□□ -0.15
Col6a5A6H584 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a5A6H584 Mtag2-201ENSMUST00000058665 714 ntBASIC14.12□□□□□ -0.15
Col6a5A6H584 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Col6a5A6H584 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a5A6H584 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a5A6H584 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a5A6H584 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a5A6H584 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a5A6H584 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a5A6H584 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.12□□□□□ -0.15
Col6a5A6H584 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Col6a5A6H584 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a5A6H584 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Col6a5A6H584 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a5A6H584 Gm34391-201ENSMUST00000203706 907 ntBASIC14.11□□□□□ -0.15
Col6a5A6H584 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a5A6H584 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a5A6H584 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Col6a5A6H584 Gm20100-201ENSMUST00000209418 2272 ntBASIC14.11□□□□□ -0.15
Col6a5A6H584 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a5A6H584 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.11□□□□□ -0.15
Col6a5A6H584 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a5A6H584 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a5A6H584 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.11□□□□□ -0.15
Col6a5A6H584 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a5A6H584 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a5A6H584 Gm32699-201ENSMUST00000221728 1988 ntBASIC14.11□□□□□ -0.15
Col6a5A6H584 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.11□□□□□ -0.15
Col6a5A6H584 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Col6a5A6H584 Gm11927-201ENSMUST00000118472 759 ntBASIC14.11□□□□□ -0.15
Col6a5A6H584 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a5A6H584 Gm37292-201ENSMUST00000192062 758 ntBASIC14.11□□□□□ -0.15
Col6a5A6H584 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a5A6H584 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC14.1□□□□□ -0.15
Col6a5A6H584 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a5A6H584 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.1□□□□□ -0.15
Col6a5A6H584 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Col6a5A6H584 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a5A6H584 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a5A6H584 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a5A6H584 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC14.1□□□□□ -0.15
Col6a5A6H584 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Col6a5A6H584 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Col6a5A6H584 Gm24589-201ENSMUST00000116692 94 ntBASIC14.1□□□□□ -0.15
Col6a5A6H584 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a5A6H584 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a5A6H584 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.09□□□□□ -0.15
Col6a5A6H584 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a5A6H584 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a5A6H584 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Col6a5A6H584 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a5A6H584 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a5A6H584 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a5A6H584 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.09□□□□□ -0.15
Col6a5A6H584 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Col6a5A6H584 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a5A6H584 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a5A6H584 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Col6a5A6H584 Gm37415-201ENSMUST00000192265 2054 ntBASIC14.09□□□□□ -0.15
Col6a5A6H584 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms