Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv17A0A140T8P8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trbv17A0A140T8P8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trbv17A0A140T8P8 Gm7860-201ENSMUST00000121190 879 ntBASIC14.23□□□□□ -0.13
Trbv17A0A140T8P8 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC14.23□□□□□ -0.13
Trbv17A0A140T8P8 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.23□□□□□ -0.13
Trbv17A0A140T8P8 CT030146.1-201ENSMUST00000220919 217 ntBASIC14.23□□□□□ -0.13
Trbv17A0A140T8P8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv17A0A140T8P8 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv17A0A140T8P8 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.23□□□□□ -0.13
Trbv17A0A140T8P8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
Trbv17A0A140T8P8 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv17A0A140T8P8 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv17A0A140T8P8 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv17A0A140T8P8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trbv17A0A140T8P8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv17A0A140T8P8 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC14.22□□□□□ -0.13
Trbv17A0A140T8P8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv17A0A140T8P8 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv17A0A140T8P8 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv17A0A140T8P8 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trbv17A0A140T8P8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv17A0A140T8P8 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv17A0A140T8P8 Gm37352-201ENSMUST00000193908 2181 ntBASIC14.22□□□□□ -0.13
Trbv17A0A140T8P8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv17A0A140T8P8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv17A0A140T8P8 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC14.22□□□□□ -0.13
Trbv17A0A140T8P8 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv17A0A140T8P8 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trbv17A0A140T8P8 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.22□□□□□ -0.13
Trbv17A0A140T8P8 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv17A0A140T8P8 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trbv17A0A140T8P8 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trbv17A0A140T8P8 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv17A0A140T8P8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trbv17A0A140T8P8 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trbv17A0A140T8P8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv17A0A140T8P8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trbv17A0A140T8P8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv17A0A140T8P8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv17A0A140T8P8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv17A0A140T8P8 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv17A0A140T8P8 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv17A0A140T8P8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv17A0A140T8P8 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv17A0A140T8P8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv17A0A140T8P8 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv17A0A140T8P8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trbv17A0A140T8P8 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv17A0A140T8P8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv17A0A140T8P8 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trbv17A0A140T8P8 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC14.21□□□□□ -0.13
Trbv17A0A140T8P8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.21□□□□□ -0.13
Trbv17A0A140T8P8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv17A0A140T8P8 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.21□□□□□ -0.13
Trbv17A0A140T8P8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv17A0A140T8P8 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv17A0A140T8P8 Gm10493-201ENSMUST00000097270 612 ntBASIC14.21□□□□□ -0.13
Trbv17A0A140T8P8 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv17A0A140T8P8 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv17A0A140T8P8 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv17A0A140T8P8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv17A0A140T8P8 Reep4-203ENSMUST00000226563 1444 ntBASIC14.21□□□□□ -0.13
Trbv17A0A140T8P8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv17A0A140T8P8 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv17A0A140T8P8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv17A0A140T8P8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv17A0A140T8P8 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv17A0A140T8P8 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv17A0A140T8P8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv17A0A140T8P8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC14.2□□□□□ -0.14
Trbv17A0A140T8P8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Trbv17A0A140T8P8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv17A0A140T8P8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv17A0A140T8P8 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv17A0A140T8P8 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trbv17A0A140T8P8 Gm38205-201ENSMUST00000192243 258 ntBASIC14.2□□□□□ -0.14
Trbv17A0A140T8P8 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv17A0A140T8P8 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv17A0A140T8P8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv17A0A140T8P8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv17A0A140T8P8 Gm10129-202ENSMUST00000193100 1316 ntBASIC14.19□□□□□ -0.14
Trbv17A0A140T8P8 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.19□□□□□ -0.14
Trbv17A0A140T8P8 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.19□□□□□ -0.14
Trbv17A0A140T8P8 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv17A0A140T8P8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv17A0A140T8P8 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv17A0A140T8P8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv17A0A140T8P8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv17A0A140T8P8 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.19□□□□□ -0.14
Trbv17A0A140T8P8 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.19□□□□□ -0.14
Trbv17A0A140T8P8 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.19□□□□□ -0.14
Trbv17A0A140T8P8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.19□□□□□ -0.14
Trbv17A0A140T8P8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv17A0A140T8P8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Trbv17A0A140T8P8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv17A0A140T8P8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv17A0A140T8P8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv17A0A140T8P8 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv17A0A140T8P8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms