Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav23A0A0G2JG17 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.2■□□□□ 0.02
Trav23A0A0G2JG17 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav23A0A0G2JG17 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav23A0A0G2JG17 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav23A0A0G2JG17 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Trav23A0A0G2JG17 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav23A0A0G2JG17 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav23A0A0G2JG17 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav23A0A0G2JG17 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav23A0A0G2JG17 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav23A0A0G2JG17 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav23A0A0G2JG17 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.19■□□□□ 0.02
Trav23A0A0G2JG17 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav23A0A0G2JG17 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.19■□□□□ 0.02
Trav23A0A0G2JG17 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav23A0A0G2JG17 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav23A0A0G2JG17 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav23A0A0G2JG17 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Trav23A0A0G2JG17 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav23A0A0G2JG17 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
Trav23A0A0G2JG17 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav23A0A0G2JG17 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav23A0A0G2JG17 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav23A0A0G2JG17 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav23A0A0G2JG17 Gm7291-201ENSMUST00000199147 382 ntBASIC15.18■□□□□ 0.02
Trav23A0A0G2JG17 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav23A0A0G2JG17 Ap3s1-204ENSMUST00000225520 957 ntBASIC15.18■□□□□ 0.02
Trav23A0A0G2JG17 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav23A0A0G2JG17 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav23A0A0G2JG17 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav23A0A0G2JG17 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.18■□□□□ 0.02
Trav23A0A0G2JG17 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav23A0A0G2JG17 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trav23A0A0G2JG17 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav23A0A0G2JG17 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trav23A0A0G2JG17 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav23A0A0G2JG17 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav23A0A0G2JG17 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav23A0A0G2JG17 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav23A0A0G2JG17 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav23A0A0G2JG17 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav23A0A0G2JG17 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Trav23A0A0G2JG17 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav23A0A0G2JG17 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav23A0A0G2JG17 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav23A0A0G2JG17 Gm27405-201ENSMUST00000184201 112 ntBASIC15.17■□□□□ 0.02
Trav23A0A0G2JG17 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.17■□□□□ 0.02
Trav23A0A0G2JG17 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav23A0A0G2JG17 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav23A0A0G2JG17 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.17■□□□□ 0.02
Trav23A0A0G2JG17 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav23A0A0G2JG17 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC15.17■□□□□ 0.02
Trav23A0A0G2JG17 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav23A0A0G2JG17 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav23A0A0G2JG17 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav23A0A0G2JG17 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav23A0A0G2JG17 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav23A0A0G2JG17 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav23A0A0G2JG17 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav23A0A0G2JG17 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav23A0A0G2JG17 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav23A0A0G2JG17 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav23A0A0G2JG17 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav23A0A0G2JG17 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav23A0A0G2JG17 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav23A0A0G2JG17 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav23A0A0G2JG17 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav23A0A0G2JG17 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Trav23A0A0G2JG17 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.16■□□□□ 0.02
Trav23A0A0G2JG17 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav23A0A0G2JG17 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav23A0A0G2JG17 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav23A0A0G2JG17 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav23A0A0G2JG17 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav23A0A0G2JG17 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav23A0A0G2JG17 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav23A0A0G2JG17 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav23A0A0G2JG17 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav23A0A0G2JG17 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav23A0A0G2JG17 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav23A0A0G2JG17 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav23A0A0G2JG17 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav23A0A0G2JG17 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav23A0A0G2JG17 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trav23A0A0G2JG17 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Trav23A0A0G2JG17 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav23A0A0G2JG17 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC15.15■□□□□ 0.02
Trav23A0A0G2JG17 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav23A0A0G2JG17 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.15■□□□□ 0.02
Trav23A0A0G2JG17 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav23A0A0G2JG17 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.15■□□□□ 0.02
Trav23A0A0G2JG17 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.15■□□□□ 0.02
Trav23A0A0G2JG17 Gm7514-201ENSMUST00000209475 934 ntBASIC15.15■□□□□ 0.02
Trav23A0A0G2JG17 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav23A0A0G2JG17 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav23A0A0G2JG17 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav23A0A0G2JG17 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav23A0A0G2JG17 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav23A0A0G2JG17 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms