Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Gm5112-201ENSMUST00000204407 2368 ntBASIC13.54□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9n-2A0A0G2JDP3 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9n-2A0A0G2JDP3 BC021767-201ENSMUST00000126387 1716 ntBASIC13.53□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9n-2A0A0G2JDP3 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav9n-2A0A0G2JDP3 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9n-2A0A0G2JDP3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC13.53□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Shroom3-211ENSMUST00000225438 5742 ntBASIC13.53□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC13.52□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.51□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9n-2A0A0G2JDP3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC13.51□□□□□ -0.25
Trav9n-2A0A0G2JDP3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC13.51□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC13.51□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9n-2A0A0G2JDP3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9n-2A0A0G2JDP3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms