Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav4-3A0A0B4J1K1 Gm43548-201ENSMUST00000197139 2353 ntBASIC12.72□□□□□ -0.37
Trav4-3A0A0B4J1K1 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC12.72□□□□□ -0.37
Trav4-3A0A0B4J1K1 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-3A0A0B4J1K1 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-3A0A0B4J1K1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-3A0A0B4J1K1 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-3A0A0B4J1K1 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-3A0A0B4J1K1 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-3A0A0B4J1K1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC12.72□□□□□ -0.37
Trav4-3A0A0B4J1K1 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-3A0A0B4J1K1 Etf1-202ENSMUST00000180351 108 ntBASIC12.72□□□□□ -0.37
Trav4-3A0A0B4J1K1 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav4-3A0A0B4J1K1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-3A0A0B4J1K1 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-3A0A0B4J1K1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-3A0A0B4J1K1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-3A0A0B4J1K1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-3A0A0B4J1K1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-3A0A0B4J1K1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-3A0A0B4J1K1 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-3A0A0B4J1K1 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-3A0A0B4J1K1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-3A0A0B4J1K1 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-3A0A0B4J1K1 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4-3A0A0B4J1K1 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4-3A0A0B4J1K1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4-3A0A0B4J1K1 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav4-3A0A0B4J1K1 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav4-3A0A0B4J1K1 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.38
Trav4-3A0A0B4J1K1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav4-3A0A0B4J1K1 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav4-3A0A0B4J1K1 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav4-3A0A0B4J1K1 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Trav4-3A0A0B4J1K1 AC121598.2-201ENSMUST00000228376 2325 ntBASIC12.71□□□□□ -0.38
Trav4-3A0A0B4J1K1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav4-3A0A0B4J1K1 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav4-3A0A0B4J1K1 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-3A0A0B4J1K1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav4-3A0A0B4J1K1 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-3A0A0B4J1K1 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-3A0A0B4J1K1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-3A0A0B4J1K1 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-3A0A0B4J1K1 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-3A0A0B4J1K1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-3A0A0B4J1K1 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-3A0A0B4J1K1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav4-3A0A0B4J1K1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav4-3A0A0B4J1K1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-3A0A0B4J1K1 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-3A0A0B4J1K1 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-3A0A0B4J1K1 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav4-3A0A0B4J1K1 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Trav4-3A0A0B4J1K1 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-3A0A0B4J1K1 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-3A0A0B4J1K1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-3A0A0B4J1K1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-3A0A0B4J1K1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-3A0A0B4J1K1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-3A0A0B4J1K1 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-3A0A0B4J1K1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav4-3A0A0B4J1K1 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-3A0A0B4J1K1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-3A0A0B4J1K1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav4-3A0A0B4J1K1 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC12.69□□□□□ -0.38
Trav4-3A0A0B4J1K1 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-3A0A0B4J1K1 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-3A0A0B4J1K1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-3A0A0B4J1K1 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-3A0A0B4J1K1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav4-3A0A0B4J1K1 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-3A0A0B4J1K1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-3A0A0B4J1K1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav4-3A0A0B4J1K1 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-3A0A0B4J1K1 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-3A0A0B4J1K1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-3A0A0B4J1K1 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-3A0A0B4J1K1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-3A0A0B4J1K1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-3A0A0B4J1K1 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-3A0A0B4J1K1 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav4-3A0A0B4J1K1 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-3A0A0B4J1K1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-3A0A0B4J1K1 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC12.68□□□□□ -0.38
Trav4-3A0A0B4J1K1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-3A0A0B4J1K1 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-3A0A0B4J1K1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-3A0A0B4J1K1 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-3A0A0B4J1K1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-3A0A0B4J1K1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-3A0A0B4J1K1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-3A0A0B4J1K1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-3A0A0B4J1K1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-3A0A0B4J1K1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-3A0A0B4J1K1 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-3A0A0B4J1K1 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-3A0A0B4J1K1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-3A0A0B4J1K1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-3A0A0B4J1K1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-3A0A0B4J1K1 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms