Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.33□□□□□ -0.12
Trav6-4A0A075B6B4 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-4A0A075B6B4 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav6-4A0A075B6B4 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Trav6-4A0A075B6B4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-4A0A075B6B4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-4A0A075B6B4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-4A0A075B6B4 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-4A0A075B6B4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-4A0A075B6B4 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Trav6-4A0A075B6B4 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav6-4A0A075B6B4 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-4A0A075B6B4 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-4A0A075B6B4 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-4A0A075B6B4 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-4A0A075B6B4 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav6-4A0A075B6B4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-4A0A075B6B4 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.32□□□□□ -0.12
Trav6-4A0A075B6B4 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-4A0A075B6B4 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC14.32□□□□□ -0.12
Trav6-4A0A075B6B4 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-4A0A075B6B4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-4A0A075B6B4 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-4A0A075B6B4 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-4A0A075B6B4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-4A0A075B6B4 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-4A0A075B6B4 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-4A0A075B6B4 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-4A0A075B6B4 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-4A0A075B6B4 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-4A0A075B6B4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-4A0A075B6B4 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-4A0A075B6B4 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-4A0A075B6B4 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-4A0A075B6B4 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-4A0A075B6B4 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-4A0A075B6B4 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-4A0A075B6B4 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-4A0A075B6B4 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-4A0A075B6B4 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-4A0A075B6B4 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-4A0A075B6B4 Iqck-206ENSMUST00000208658 2891 ntBASIC14.31□□□□□ -0.12
Trav6-4A0A075B6B4 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-4A0A075B6B4 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav6-4A0A075B6B4 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-4A0A075B6B4 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-4A0A075B6B4 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-4A0A075B6B4 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav6-4A0A075B6B4 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Trav6-4A0A075B6B4 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav6-4A0A075B6B4 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-4A0A075B6B4 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-4A0A075B6B4 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC14.31□□□□□ -0.12
Trav6-4A0A075B6B4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-4A0A075B6B4 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-4A0A075B6B4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Trav6-4A0A075B6B4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav6-4A0A075B6B4 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-4A0A075B6B4 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav6-4A0A075B6B4 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav6-4A0A075B6B4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Trav6-4A0A075B6B4 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-4A0A075B6B4 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.3□□□□□ -0.12
Trav6-4A0A075B6B4 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-4A0A075B6B4 Gm26571-201ENSMUST00000181399 666 ntBASIC14.3□□□□□ -0.12
Trav6-4A0A075B6B4 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.3□□□□□ -0.12
Trav6-4A0A075B6B4 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-4A0A075B6B4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-4A0A075B6B4 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-4A0A075B6B4 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-4A0A075B6B4 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav6-4A0A075B6B4 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-4A0A075B6B4 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav6-4A0A075B6B4 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trav6-4A0A075B6B4 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-4A0A075B6B4 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-4A0A075B6B4 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-4A0A075B6B4 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-4A0A075B6B4 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav6-4A0A075B6B4 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.29□□□□□ -0.12
Trav6-4A0A075B6B4 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC14.29□□□□□ -0.12
Trav6-4A0A075B6B4 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.29□□□□□ -0.12
Trav6-4A0A075B6B4 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-4A0A075B6B4 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.29□□□□□ -0.12
Trav6-4A0A075B6B4 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-4A0A075B6B4 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-4A0A075B6B4 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-4A0A075B6B4 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-4A0A075B6B4 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-4A0A075B6B4 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-4A0A075B6B4 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-4A0A075B6B4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-4A0A075B6B4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-4A0A075B6B4 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.28□□□□□ -0.12
Trav6-4A0A075B6B4 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-4A0A075B6B4 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav6-4A0A075B6B4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Trav6-4A0A075B6B4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-4A0A075B6B4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-4A0A075B6B4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms